DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15160 and Rprd1b

DIOPT Version :10

Sequence 1:NP_001286047.1 Gene:CG15160 / 35109 FlyBaseID:FBgn0032688 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001278063.1 Gene:Rprd1b / 70470 MGIID:1917720 Length:326 Species:Mus musculus


Alignment Length:325 Identity:76/325 - (23%)
Similarity:144/325 - (44%) Gaps:64/325 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TFDEELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLANDVI 68
            :|.|...|.:|..|.::|:.:|.:|.|.:.||.:...|:..|....::.:.:.:|...|||||||
Mouse     3 SFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVI 67

  Fly    69 QYSKRKRYEFVECWATALQRATTMV---RDERVKDKILRIFKIWEQREIYNEEYLSDLSGLLNI- 129
            |.||||..||...:.:.|..|.:.|   .||..|..:.|:..||::|.:|..|::..|.  |:: 
Mouse    68 QNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLK--LSME 130

  Fly   130 ---APPKKS--------------QVDVSDEFQNA--------------TLIAQVRECVELAEITD 163
               :||.|:              |.:..|::..:              .||..:::....|....
Mouse   131 DSKSPPPKAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKALQDLENAASGDA 195

  Fly   164 KSMQKLPKPPTFEIEVIK--QQLKDKSHSGNIEKEVERCVAFINAYNKNLQNEIKSRKAVLASIE 226
            ...||:...|. |::.:.  :::.||..:..:.|.|:.....:..||..|..|::.|:      :
Mouse   196 TVRQKIASLPQ-EVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRR------Q 253

  Fly   227 AAKKFYEHQGKEVKVVA------SAYKSFGTRIKIVKRKLD---ETIPNLA---------SPIPS 273
            .|:...|:...:.:|::      ..||....|:..|:::|.   :::|:|:         :|:||
Mouse   254 LARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTGGLAPLPS 318

  Fly   274  273
            Mouse   319  318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15160NP_001286047.1 CID_RPRD_like 7..127 CDD:340778 40/122 (33%)
Rprd1bNP_001278063.1 CID_RPRD1B 3..131 CDD:340809 42/129 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..148 3/19 (16%)
CREPT 178..324 CDD:465181 29/148 (20%)

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