DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG15160 and rprd1b

DIOPT Version :9

Sequence 1:	NP_001286047.1	Gene:	CG15160 / 35109	FlyBaseID:	FBgn0032688	Length:	834	Species:	Drosophila melanogaster
Sequence 2:	NP_001004796.1	Gene:	rprd1b / 448020	XenbaseID:	XB-GENE-949983	Length:	325	Species:	Xenopus tropicalis

Alignment Length:	321	Identity:	73/321 - (22%)
Similarity:	140/321 - (43%)	Gaps:	57/321 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 TFDEELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLANDVI 68
            :|.|...|.:|..|.::|:.:|.:|.|.:.||.:...|:..|....::.:...:|...|||||||
Frog     3 SFTEPALEKKLSELSNSQQSVQTLSLWLIHHRKHAASIVTVWQRELRKAKSSRKLTFLYLANDVI 67

  Fly    69 QYSKRKRYEFVECWATALQRATTMVRDER---VKDKILRIFKIWEQREIYNEEYLSDLS-GLLNI 129
            |.||||..||...:...|..|.:.|..|.   .:..:.|:..||::|.:|:.:::..|. .:.|.
Frog    68 QNSKRKGPEFTREFENVLLDAFSHVSSEAEDGCRKPLERLLHIWQERSVYSADFIQQLRLSIEND 132

  Fly   130 APPKKSQVDVSDEFQNATLIAQVRECVE----------------LAEITDKSMQKLPKPPTFEIE 178
            ..|:  :..|::|........|::|..:                |.|...|::|.|....:.:..
Frog   133 ESPR--ETPVNEEKSLKRTFQQIQEEDDDYPGNYSPRDTSAGPLLTEDLIKALQDLENAASGDAA 195

  Fly   179 V---------------IKQQLKDKSHSGNIEKEVERCVAFINAYNKNLQNEIKSR----KAVLAS 224
            |               :.:::.||..:..:.|.|:.....:..||..|..|:..|    |.::..
Frog   196 VRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACILLAEYNGRLAAELDDRRQLAKMLMEY 260

  Fly   225 IEAAKKFYEHQGKEVKVVASAYKSFGTRIKIVKRKLD---ETIPNLA---------SPIPS 273
            .:|.|:...::.|:::    .||....|:..|:::|.   :::|:|:         :|:||
Frog   261 TQAQKETLSNKEKKLE----EYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTGGLAPLPS 317

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG15160	NP_001286047.1	RPR	10..128	CDD:214731	36/121 (30%)
rprd1b	NP_001004796.1	CID_RPRD1B	3..131	CDD:340809	38/127 (30%)
rprd1b	NP_001004796.1	CREPT	177..322	CDD:374635	28/145 (19%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1091009at2759
OrthoFinder	1	1.000	-	-		FOG0000693
OrthoInspector	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR12460
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1901
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	5.050