DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15160 and rprd1b

DIOPT Version :9

Sequence 1:NP_001286047.1 Gene:CG15160 / 35109 FlyBaseID:FBgn0032688 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_005162475.1 Gene:rprd1b / 321636 ZFINID:ZDB-GENE-030131-355 Length:336 Species:Danio rerio


Alignment Length:332 Identity:74/332 - (22%)
Similarity:142/332 - (42%) Gaps:68/332 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TFDEELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLANDVI 68
            :|.|...|.:|..|.::|:.:|.:|.|.:.||.:...|::.|....|:.:...:|...|||||||
Zfish     3 SFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHAALIVRVWHRELKKAKSSRKLTFLYLANDVI 67

  Fly    69 QYSKRKRYEFVECWATALQRATTMVR---DERVKDKILRIFKIWEQREIYNEEYLSDLSGLLNI- 129
            |.||:|..||.:.:...|..|.:.|.   |:..|.::.|:..||::|.:|..:::..|.  |.| 
Zfish    68 QNSKKKGPEFAKDFEGVLIDACSHVARDGDDGCKKQMDRLLTIWQERNLYRPDFIQQLK--LTID 130

  Fly   130 ---APPKKS--QVDVSDEFQNATLIAQVRE---------------------CVELAEITDKSMQK 168
               :|..|:  |.:..|.........:|:|                     ..:|.|...|::|.
Zfish   131 DSESPKHKTAGQRNADDRKNLKRSYQKVQEEEEEEDDDYRGHYSPRETDAAAPQLTEDLVKALQD 195

  Fly   169 LPKPPT----------------FEIEVIKQQLKDKSHSGNIEKEVERCVAFINAYNKNLQNEIKS 217
            |....:                .::.::::...||..:..:.|.|:.....:..||..|..|::.
Zfish   196 LENAASGDAAVRQKIASLPQEVQDVSLLEKITADKQAADKLSKTVDEACLLLAEYNGRLAAELED 260

  Fly   218 RKAVLAS----IEAAKKFYEHQGKEVKVVASAYKSFGTRIKIVKRKLD---ETIPNLA------- 268
            |:.:...    |::.|.....:.|:::    .||....|:..|:::|.   :::|:|:       
Zfish   261 RRQLARMLTEYIQSQKDALNEREKKLE----EYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTG 321

  Fly   269 --SPIPS 273
              :|:||
Zfish   322 GLAPLPS 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15160NP_001286047.1 RPR 10..128 CDD:214731 37/120 (31%)
rprd1bXP_005162475.1 RPR 8..126 CDD:214731 36/117 (31%)
CREPT 187..333 CDD:293174 26/146 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2669
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091009at2759
OrthoFinder 1 1.000 - - FOG0000693
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12460
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1901
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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