DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15160 and Rprd2

DIOPT Version :9

Sequence 1:NP_001286047.1 Gene:CG15160 / 35109 FlyBaseID:FBgn0032688 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_008759565.1 Gene:Rprd2 / 100364568 RGDID:2320792 Length:1451 Species:Rattus norvegicus


Alignment Length:1299 Identity:262/1299 - (20%)
Similarity:396/1299 - (30%) Gaps:536/1299 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EELFETRLEALKDTQEGIQQMSNWCLQHRSNHKKIIQCWLNVFKRVRVDHRLVLFYLANDVIQYS 71
            |...:.:.:::.:|.|.||.:|:||::::.:|..|:..|:...:|....|||.||||||||||..
  Rat    24 ESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSTYPHRLNLFYLANDVIQNC 88

  Fly    72 KRKR-YEFVECWATALQRATTMVRDERVKDKILRIFKIWEQREIYNEEYL--------------S 121
            |||. ..|.|.:|..|..|..:|:|..|...|.|||||||.|.:|.|:.:              .
  Rat    89 KRKNAIIFRESFADVLPEAAALVKDPSVSKSIERIFKIWEDRNVYPEDMIVALREALSTTFKTQK 153

  Fly   122 DLSGLLNIAPP---KKSQVDVSD----------EFQNATLIAQV---RECVELAEITDKSMQKLP 170
            .|...||..|.   ||||...:.          ||::..||.::   :...:..|:.:|.:.   
  Rat   154 QLKENLNKQPNKQWKKSQTSTNPKAALKSKIVAEFRSQALIEELLMYKRSEDQIELKEKQLS--- 215

  Fly   171 KPPTFEIEVIKQQ----LKDKSHSGNIEKEVERCVAFINAYNKNLQNEIKSRKAVLASIEAAKKF 231
               |..::|...:    ||||:......||.|...:.:..:...|..::|:..::..::|.|..|
  Rat   216 ---TMRVDVCSTETLKCLKDKTGGKKFSKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIF 277

  Fly   232 YEHQGKEVKVVASAYKSFGTRIKIVKRKLDE---TIPN-LASPIPSPDVNAPSP----------- 281
            ||.|.|||||||:|||:|..|:..:|:|||:   |:|: ..||:|||.::||||           
  Rat   278 YEAQYKEVKVVANAYKTFANRVNNLKKKLDQLKSTLPDPEESPVPSPSMDAPSPTGSESPFQGMG 342

  Fly   282 ----------------------ERDAD-------------------------------------- 286
                                  .||.:                                      
  Rat   343 GEESQSPTMESDKSATPEPVTDNRDVEDMELSDVEDDGSKIIVEDRKEKPVEKPAVSTGVVTKST 407

  Fly   287 ------------------------------------LQLPEENNIPLNLFGGSINGFTSYLDGGK 315
                                                |.||...|:.|......::..||.:..  
  Rat   408 ENISKTSPCAPPSVPTTAAPPLPKPLNTSLLSPSPTLVLPNLANVDLAKISSILSSLTSVMKN-- 470

  Fly   316 LPFDINDFKRDSKDRGSAIEVI--GSRSDDEAYVPS----ANFYK-----PEPISSA----DSSS 365
              ..::...|.|....::...:  |.::...|..||    ||...     ||.|.||    .:.|
  Rat   471 --TGVSSASRPSPGTPTSPSSLSSGLKTPAPATTPSHNPLANILSKVEITPESILSALSKTQTQS 533

  Fly   366 IPGL--------------------------------GGSAV------------------YTPDAP 380
            .|.|                                .||||                  |:|::.
  Rat   534 APALQGLSSLLQSVTGNPVPASEAASQSTAASPASTTGSAVKGRNLLSNTQSFISKSFNYSPNSS 598

  Fly   381 LF---------GSNSQDQYVPPP----PSHLYGDNG--NGGSSGGPSD----QYTPAPMPPP--- 423
            ..         .|..|...:|..    ||...|..|  |...:..|::    |.:....|.|   
  Rat   599 TSEVSSTSASKASVGQSPVLPSTTFKLPSSSLGFTGTHNTSPAAPPTEVAMCQSSEVSKPKPESE 663

  Fly   424 ---------------------------PLPPSLG---PSSGSADDF----NSTWNMSMSWTP--- 451
                                       |:..|||   ||.|.:.||    .||...::..||   
  Rat   664 STSPSLEMKIHNFLKGNPGFSGLNLNIPILSSLGSSAPSEGHSSDFQRGPTSTSVDNIDGTPVRD 728

  Fly   452 ------------------------LDSSLNSSGASSSSY-------ANQSTPNSPPH-------- 477
                                    |.|.:.|.|:|:.|.       .::|.|..||.        
  Rat   729 ERSGTPTQDEMMDKPTSSSVDTMSLLSKIISPGSSTPSSIRSPPAGGDESYPQEPPSSVSTYRPF 793

  Fly   478 -------FDRKASSTAAPIEYNELLHTN-----PAALGAEDVDHRTLQL---PPAFEFGAKLGLS 527
                   :.:.:|:...|   :.|:.::     |.....||.|:|..:.   ||:    |.:.|.
  Rat   794 GLGGGSPYKQSSSAVERP---SSLMDSSQEKLFPDTSFQEDEDYRDFEYSGPPPS----AMMNLE 851

  Fly   528 KD------KSRQLVD----------IDHR----------------------------------NL 542
            |.      ||.:|.|          .:||                                  ..
  Rat   852 KKPAKSILKSSKLSDATEYQPILSSYNHRAQEFGGKSAFPPSVRALLDSSENCDRLSSPPGLFGA 916

  Fly   543 ISLTGSPGGAEKDFTGGDVDYRIVPSPNDEGI-------MAPPGNNYAKSKTCSPLKSNASSSSE 600
            .|:.||..|:|:..:....|....|..|..|:       :..|...|..|....|.:|..||.:.
  Rat   917 FSIRGSEPGSERSPSPSKNDSFFTPDSNHSGLSQSTAGHLTLPQTQYPDSPHSVPHRSVFSSQNT 981

  Fly   601 SDRVDGATRYDPADMVIDMDMSDDD-------IDESLREPKEDNGDAEIDANGALTPSRPVLLET 658
            .....|.......:.|:...:|...       :..:.|:|.:|....:....|  |.|..|.|  
  Rat   982 LAAPAGHPPTSGVEKVLASTISTTSTIEFKNMLKNASRKPSDDKHFGQTPNKG--TSSDGVSL-- 1042

  Fly   659 PPDFINPWDANNSFMGPPLPDEEDQQQHH------------------EQQQNQQQELQQHHQHQQ 705
                       ::...|.||..:.||:.|                  |::....:.|..|:...:
  Rat  1043 -----------SNLTQPSLPTTDQQQEEHYRIETRVSSSCLDLPDSTEEKGAPIETLGYHNAANR 1096

  Fly   706 HQQQQP-------------------------WNQMNR---------------MQMGGGGA----- 725
            ....:|                         |..::.               ..:||||:     
  Rat  1097 RMSGEPIQTVESVRVPGKGNRGHGREVSRVGWFDLSTPGSSFDNGPSSASELASLGGGGSGGLTG 1161

  Fly   726 ----PPPPRPPYGQ--------------------PFP-----PFQRFPGPPMNGPDGMQRGRGRG 761
                |...|.|..|                    |.|     ||||.|..|.:.|....:..|..
  Rat  1162 FKTTPYKERAPQFQESVTSFRSNSFNSTFEHHLPPSPLEHGTPFQREPVGPSSAPPAPPKDHGGI 1226

  Fly   762 RGWNGP---------------------GPGPFRPPYQRMPGPGFDGPGPGPRPFFPRGGGPGGP 804
            .....|                     ||.|  ||.:. .|..|..|.|.|.|.....||.|.|
  Rat  1227 FSREAPTHLPSVDLSNPFTKEASLAHAGPPP--PPGEH-SGVPFPPPPPPPPPGELSSGGSGVP 1287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15160NP_001286047.1 RPR 10..128 CDD:214731 47/132 (36%)
Rprd2XP_008759565.1 RPR 27..145 CDD:214731 46/117 (39%)
CREPT 219..337 CDD:293174 43/117 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337277
Domainoid 1 1.000 62 1.000 Domainoid score I10136
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3737
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1091009at2759
OrthoFinder 1 1.000 - - FOG0000693
OrthoInspector 1 1.000 - - oto98122
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12460
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4975
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.000

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