DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4b

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_031756141.1 Gene:pde4b / 780324 XenbaseID:XB-GENE-963512 Length:733 Species:Xenopus tropicalis


Alignment Length:636 Identity:143/636 - (22%)
Similarity:257/636 - (40%) Gaps:142/636 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 LARMIFEEQS-------TIEHMVFRILTHMQSLIQCQRVQIL-LVHEADKGSFSRVFDFEANDLS 650
            ::|:..:|.|       |:|.:.:       .|.|.:.:|.. .|.|.....|.|:.:.|...||
 Frog   203 ISRVNLQEDSYQKIAMDTLEELDW-------CLDQLETIQTYRSVSEMASNKFKRMLNRELTHLS 260

  Fly   651 EEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKN 715
            |   .||:....|.:     |:.........|.:|:..:.||      |..  |.:.::.     
 Frog   261 E---MSRSGNQVSEY-----ISSTFLDKQNDVEIPSPTQKDR------EKK--KKQQLMT----- 304

  Fly   716 SLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTL-EVLSY 779
               ||.||.:|::. :.|:.|.     :..|    |:......|..|.:..:.|..:.: :|.||
 Frog   305 ---QISGVKKLMHS-SSLNNTS-----MSRF----GVKTEYEDMLSKELEDLNKWGLNIFKVASY 356

  Fly   780 HASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACL--RMFLDLDFVERFHIDYEV 842
            ..:..:                                    .|:  .:|.:.|.::.|.|..:.
 Frog   357 SCNRPL------------------------------------TCIMYAIFQERDLLKTFKIPADT 385

  Fly   843 LCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRG 906
            |..:.::::.:|. :|.|||..||.:|.|....:|:|.....:|.::|.||.|.....||:||.|
 Frog   386 LITYTMTLEDHYHSDVAYHNSLHAADVTQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPG 450

  Fly   907 TNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILST 970
            .:|.|.|..:|.||.:|: .|.:|:||......:|......|..||:......:.:::.|.:|:|
 Frog   451 VSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHCDIFQNLTKKQRQSLRKMVIDMVLAT 515

  Fly   971 DLAVYFKKRGPF--LESVSQPTSYWVA-----EEPRALLRAMSMTVC-DLSAITKPWEIEKRVAD 1027
            |::.:.......  :....:.||..|.     .:...:||  :|..| |||..||..|:.::..|
 Frog   516 DMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLR--NMVHCADLSNPTKSLELYRQWTD 578

  Fly  1028 LVSSEFFEQGDMEKQE-LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEP--- 1088
            .:..|||:|||.|::. :.|:|   |..:....:...||.|||.|..|::|.:|   |.::|   
 Frog   579 RIMEEFFQQGDKERERGMEISP---MCDKHTASVEKSQVGFIDYIVHPLWETWA---DLVQPDAQ 637

  Fly  1089 -LVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSDD---DVAASEAEVAV 1149
             :::.:.||| :|      .::...|...|..::..:      ||:.:|:.   ::...|.:   
 Frog   638 DILDTLEDNR-NW------YQSMIPQSPSPLLDEHDK------DCQGLSEKFHFELTLEEED--- 686

  Fly  1150 DSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDAD--ADD 1198
               |:....:|..::..||.....|.       .|..:|..|.|.:  .||
 Frog   687 ---SDGHDKDGDCLSFYSSTKTLHIV-------DQGMEDSPDADTEFLTDD 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 31/151 (21%)
PDEase_I 859..1093 CDD:459723 73/247 (30%)
pde4bXP_031756141.1 PDE4_UCR 164..279 CDD:465648 20/90 (22%)
PDEase_I 403..643 CDD:459723 73/247 (30%)
Blue background indicates that the domain is not in the aligned region.

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