DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde4a

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009298019.1 Gene:pde4a / 572061 ZFINID:ZDB-GENE-131125-7 Length:777 Species:Danio rerio


Alignment Length:642 Identity:142/642 - (22%)
Similarity:240/642 - (37%) Gaps:158/642 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 LARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEATSRT 658
            |||...||.......:..|.||..            |.|.....|.|:.:.|.:.|||   .||:
Zfish   221 LARETLEELDWCLDQLETIQTHRS------------VSEMASNKFKRMLNRELSHLSE---MSRS 270

  Fly   659 SPYESRFPINIGITGHVATT----GETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQ 719
            ....|.:         ::||    ...|.:|:....:|                     :..:..
Zfish   271 GNQVSEY---------ISTTFLDKQNEVEIPSPTLRER---------------------EKPMSH 305

  Fly   720 IIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASAT 784
            |.||.:|                              ||.......|:.:..|..|    ...|.
Zfish   306 ISGVKKL------------------------------THSSSLTSAALPRFGVKTE----QEDAL 336

  Fly   785 MDEAHRLRR--LRVPSAVHFRLHDFKFDDIHFEDDDTLKACL--RMFLDLDFVERFHIDYEVLCR 845
            ..|.:.|.:  |.:            |....|.::..| :|:  .:|.:.|.::.|.|..:....
Zfish   337 ARELNDLNKWGLNI------------FHVAEFSNNRPL-SCIMFAIFQERDLLKTFRIPVDTFIT 388

  Fly   846 WLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNN 909
            ::::::.:|. ||.|||..||.:|.|....:|:|.....:|.::|.||.:.....||:||.|.:|
Zfish   389 YVMTLEDHYHANVAYHNSLHAADVTQSTHVLLSTPALDAVFSDLEILAALFAAAIHDVDHPGVSN 453

  Fly   910 SFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLA 973
            .|.|..:|.||.:|: .|.:|:||......:|:.....|..||:......:.:::.|.:|:||::
Zfish   454 QFLINTNSELALMYNDESVLENHHLAVGFKLLHEENCDIFQNLTKRQRQSLRKLVIDMVLATDMS 518

  Fly   974 VYFKKRGPF--LESVSQPTSYWVA-----EEPRALLRAMSMTVC-DLSAITKPWEIEKRVADLVS 1030
            .:.......  :....:.||..|.     .:...:||  :|..| |||..|||..:.::..:.:.
Zfish   519 KHMSLLADLKTMVETKKVTSSGVLMLDHYNDRIQVLR--NMVHCADLSNPTKPLAVYRQWTERIM 581

  Fly  1031 SEFFEQGDMEKQE-LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEP----LV 1090
            .|||:|||.|::. :.|:|   |..:....:...||.|||.|..|::|   |..|.:.|    ::
Zfish   582 EEFFQQGDKERERGMEISP---MCDKHTASVEKSQVGFIDYIVHPLWE---TWGDLVHPDAQEIL 640

  Fly  1091 EGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEK 1155
            :.:.|||       |..::...|...|..::....:.|   |:.....::.. |.|...|.|   
Zfish   641 DTLEDNR-------DWYQSTIPQSPSPPPDRPDNELES---CRNKFQFELTL-EGETVQDGP--- 691

  Fly  1156 ASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADDVDEQAAEENGHDAE 1212
                                 .||........|:...|.:|::.:|..|||...|.|
Zfish   692 ---------------------PSHNHIVIHDQDEKKDDEEAEEAEEDEAEEKMEDGE 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 25/154 (16%)
PDEase_I 859..1093 CDD:459723 71/247 (29%)
pde4aXP_009298019.1 PDE4_UCR 168..284 CDD:465648 21/86 (24%)
PDEase_I 403..643 CDD:459723 71/247 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.