DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4a

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009298019.1 Gene:pde4a / 572061 ZFINID:ZDB-GENE-131125-7 Length:777 Species:Danio rerio


Alignment Length:646 Identity:143/646 - (22%)
Similarity:239/646 - (36%) Gaps:166/646 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   594 LARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEATSRT 658
            |||...||.......:..|.||..            |.|.....|.|:.:.|.:.|||   .||:
Zfish   221 LARETLEELDWCLDQLETIQTHRS------------VSEMASNKFKRMLNRELSHLSE---MSRS 270

  Fly   659 SPYESRFPINIGITGHVATT----GETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQ 719
            ....|.:         ::||    ...|.:|:....:|                     :..:..
Zfish   271 GNQVSEY---------ISTTFLDKQNEVEIPSPTLRER---------------------EKPMSH 305

  Fly   720 IIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASAT 784
            |.||.:|                              ||          ..|:|...|......|
Zfish   306 ISGVKKL------------------------------TH----------SSSLTSAALPRFGVKT 330

  Fly   785 MDEAHRLRRLRVPSAVHFRLHDFK------FDDIHFEDDDTLKACL--RMFLDLDFVERFHIDYE 841
            ..|          .|:...|:|..      |....|.::..| :|:  .:|.:.|.::.|.|..:
Zfish   331 EQE----------DALARELNDLNKWGLNIFHVAEFSNNRPL-SCIMFAIFQERDLLKTFRIPVD 384

  Fly   842 VLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHR 905
            ....::::::.:|. ||.|||..||.:|.|....:|:|.....:|.::|.||.:.....||:||.
Zfish   385 TFITYVMTLEDHYHANVAYHNSLHAADVTQSTHVLLSTPALDAVFSDLEILAALFAAAIHDVDHP 449

  Fly   906 GTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILS 969
            |.:|.|.|..:|.||.:|: .|.:|:||......:|:.....|..||:......:.:::.|.:|:
Zfish   450 GVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLHEENCDIFQNLTKRQRQSLRKLVIDMVLA 514

  Fly   970 TDLAVYFKKRGPF--LESVSQPTSYWVA-----EEPRALLRAMSMTVC-DLSAITKPWEIEKRVA 1026
            ||::.:.......  :....:.||..|.     .:...:||  :|..| |||..|||..:.::..
Zfish   515 TDMSKHMSLLADLKTMVETKKVTSSGVLMLDHYNDRIQVLR--NMVHCADLSNPTKPLAVYRQWT 577

  Fly  1027 DLVSSEFFEQGDMEKQE-LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEP-- 1088
            :.:..|||:|||.|::. :.|:|   |..:....:...||.|||.|..|::|   |..|.:.|  
Zfish   578 ERIMEEFFQQGDKERERGMEISP---MCDKHTASVEKSQVGFIDYIVHPLWE---TWGDLVHPDA 636

  Fly  1089 --LVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDS 1151
              :::.:.|||       |..::...|...|..::....:.|   |:.....::.. |.|...|.
Zfish   637 QEILDTLEDNR-------DWYQSTIPQSPSPPPDRPDNELES---CRNKFQFELTL-EGETVQDG 690

  Fly  1152 PSEKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADDVDEQAAEENGHDAE 1212
            |                        .||........|:...|.:|::.:|..|||...|.|
Zfish   691 P------------------------PSHNHIVIHDQDEKKDDEEAEEAEEDEAEEKMEDGE 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 25/154 (16%)
PDEase_I 859..1094 CDD:278654 71/248 (29%)
pde4aXP_009298019.1 PDEase_I 403..644 CDD:278654 71/248 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589311
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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