DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4cb

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_021335380.1 Gene:pde4cb / 571344 ZFINID:ZDB-GENE-030131-4075 Length:721 Species:Danio rerio


Alignment Length:664 Identity:146/664 - (21%)
Similarity:260/664 - (39%) Gaps:123/664 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   615 HMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTG 679
            |.:.:|.....|:|......:|:.:.:...:  |.|.:. .|.|:| :|....|:....:...|.
Zfish   129 HGEDMIVTPFAQVLASLRTVRGNVAALTHMQ--DRSNKR-PSGTNP-QSACKTNLSDEAYQKLTV 189

  Fly   680 ETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVE 744
            ||:        :..|..:|:....:.|..:.....|...:::.     .:..:|..|....|.|.
Zfish   190 ETL--------EELDWCLDQLETLQTRHSVSEMASNKFKRMLN-----RELTQLSETSRSGNQVS 241

  Fly   745 AFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHR--------LRRLR------ 795
            .|.               |...:.|| ..:|:||   :|..:|..|        :|:|.      
Zfish   242 EFI---------------ASTILQKQ-YDVELLS---AACKEEKKRRPMSQISGVRKLSPSPSLP 287

  Fly   796 ---VP----SAVHFRLHDFKFDDIHFEDDDTLKAC------------LRMFLDLDFVERFHIDYE 841
               :|    :..|..|...:.:|:.....|..|..            ..:|.:.|.::.|.|..:
Zfish   288 PTCIPRFGVNTQHESLLAKELEDLDRWGIDIFKIAEYSGNRPLTVMMYTIFQERDLLKTFKIPSD 352

  Fly   842 VLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHR 905
            ....:|::::.:|. :|.|||..||.:|.|....:|:|.....:|.::|.:|.:.....||:||.
Zfish   353 TFLTFLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEDVFTDLEIMAALFASAIHDVDHP 417

  Fly   906 GTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILS 969
            |..|.|.|..:|.||.:|: .|.:|:||......:|......|..|||......:.::..|.:|:
Zfish   418 GVTNQFLINTNSELALMYNDASVLENHHLAVGFKLLQEENCDIFCNLSKKQRQSLRQMTIDMVLA 482

  Fly   970 TDLAVYFKKRGPFLESV------SQPTSYWV------AEEPRALLRAMSMTVC-DLSAITKPWEI 1021
            ||::    |...||..:      .:.||..|      ::..:.|   .:|..| |||..|||.|:
Zfish   483 TDMS----KHMNFLADLKTMVETKKVTSQGVLLLDNYSDRIQVL---QNMVHCADLSNPTKPLEL 540

  Fly  1022 EKRVADLVSSEFFEQGDMEKQE-LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATL-SD 1084
            .::..|.:..|||.|||.|:.: ::::|   |..:....:...||.|||.|..|::|.:|.| ..
Zfish   541 YRKWTDRIMVEFFSQGDRERDKGIDVSP---MCDKHTASMENTQVGFIDYIIHPLWETWADLVHP 602

  Fly  1085 KLEPLVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAV 1149
            ..:.:::.:.||| .|..    .....|....|||:..:...:: |........::...|.:..:
Zfish   603 DAQDILDTLEDNR-EWYQ----SMIPRSPSPTPEEQDSRPTGVT-GSAGEKFQFELTLEEEDGEL 661

  Fly  1150 DSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADDVDEQAAEENGHDAEVD 1214
            ::..|...:..|....:          ..|| .|.|......:|:...::|:          |:.
Zfish   662 ETEEEHTDIERSRTMTD----------PEHP-QTSPLGITTILDSSERELDQ----------ELT 705

  Fly  1215 EASCRSNSTCSSST 1228
            ..|.....|.||||
Zfish   706 SVSALQLETSSSST 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 24/146 (16%)
PDEase_I 859..1094 CDD:278654 73/250 (29%)
pde4cbXP_021335380.1 PDEase_I 371..608 CDD:306695 73/246 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589309
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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