DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde8b

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009293455.1 Gene:pde8b / 571011 ZFINID:ZDB-GENE-091117-3 Length:874 Species:Danio rerio


Alignment Length:875 Identity:160/875 - (18%)
Similarity:307/875 - (35%) Gaps:252/875 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 ICNELEVRTLC------------------HKILQNVSILLNADRGS----------LFLVQGRCN 450
            :|.|.|.:|.|                  |:.:|.:.:....|..|          .|    |||
Zfish    80 MCTEAETQTSCTSVKVSGAEDRLGPMRLSHEPIQVLLVFAKEDSQSDAFWWACERAAF----RCN 140

  Fly   451 ---GPDGLKKCLVSKLFDVC------PRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAY 506
               .|:...:|.:.|..::.      ||    ..|.:...|:...|.::.|              
Zfish   141 IARTPESALECFLDKHHEIVIIDGRHPR----YFEAEAICRMIRATKLSEH-------------- 187

  Fly   507 QDERFNCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVI----------NKMNGECFSEIDEKVF 561
                            |..|..||...|..:...|..::          |.....|::|:     
Zfish   188 ----------------TVILAVMPQTPSDQEEPSVLPLLSAGFSRRYLENSSVSACYNEL----- 231

  Fly   562 SSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFE--EQSTIEHMVFRILTHMQSLIQCQR 624
                    |.|.:.::  ::|.:::....:........|  |.|:.:|::..:....:.::...|
Zfish   232 --------IQLEHGEV--RAQFKLRACNAVFTALEQCQEAVEISSEDHVIQYVNPAFEKMMGYHR 286

  Fly   625 VQIL-----LVHEADKGS----------FSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGH 674
            .:::     .:..:||.|          ..:..:::....|..::......|....|: :|..|.
Zfish   287 GELIGKELTELPRSDKNSADLLDTINTCIKKGKEWQGIYFSRRKSGDSIQQYVKITPV-VGQGGK 350

  Fly   675 VATTGETVNVPNAYED-----------------------------DRFDASVDENSCFKHRS--- 707
            :.   ..|::...|.|                             ||...|||..|...|.|   
Zfish   351 IR---HFVSIKRPYSDNHRQVHKLSKEEKCCGEHSQSECNSLRHKDRRKESVDVRSISSHSSDAP 412

  Fly   708 ------------ILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMY 760
                        |..|.|:..:.::|.:|....:.:.:...:..:..:|.        :..|.:|
Zfish   413 SLQNRRYSSMARIHSMTIEAPITKVINIINAAQESSPVTVAEALDRVLEI--------LRTTELY 469

  Fly   761 EKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLR---------------------------VPS 798
            ...:.:......|.:::    ...|.:.  ||||.                           :|.
Zfish   470 SPQLASKEDDPHTNDLV----GGLMSDG--LRRLSGNEYIFSKSALQNMSQSQLGVPVPLNDIPP 528

  Fly   799 AVHFRLHD---FKFDDIHFEDDDTLKAC----LRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRN 856
            ::...|::   ::|:.:..|.....:..    |::|......|..:.....|..||..::.||.:
Zfish   529 SIAELLNEEEQWEFNILELEAATHKRPLSYLGLKIFSAFGVCEFLNCSESTLRLWLQVIETNYHS 593

  Fly   857 V-TYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLA 920
            . :|||..||.:|.......|...:......:::.:|.::....||:||.|..|||...|.|.||
Zfish   594 SNSYHNSTHAADVLHATAYFLRKERVKASLDQLDEVAALLAATVHDVDHPGRTNSFLCNAGSELA 658

  Fly   921 QLYS-TSTMEHHH----FDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRG 980
            .||: |:.:|.||    |.  |.:.:|..| |..|:....:..:.:.:.|.:|:|::..:|:...
Zfish   659 ILYNDTAVLESHHAALAFQ--LTVRDSKCN-IFKNMERTQFRTLRQAIIDMVLATEMTRHFEHVN 720

  Fly   981 PFLESVSQPTSYWVAE--------------------EPRALLRAMSMTVCDLSAITKPWEIEKRV 1025
            .|:.|:::|.|. :.|                    |.|.|::.|.:...|::...:|.|:....
Zfish   721 KFVNSINKPMSA-IEETSSNSEGSDCEGQASIRNSPENRLLIKRMLIKCADVANPCRPLELCIEW 784

  Fly  1026 ADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLPIY---EAFATLSDKLE 1087
            |..:|.|:|.|.|.||::.....:.:.:| ....:|..|::|||.....::   :|||:|...:|
Zfish   785 AGRISEEYFAQTDEEKRQGLPVVMPVFDR-NTCSIPKSQISFIDYFITDMFDAWDAFASLPGLME 848

  Fly  1088 PLVEGVRDNRGHWIDLADVVKTKTSQDQEP 1117
            .|.|    |..:|.:| |.:|.|:.:...|
Zfish   849 HLAE----NYKYWKNL-DEMKCKSLRPPPP 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 30/208 (14%)
GAF 611..762 CDD:214500 28/209 (13%)
PDEase_I 859..1094 CDD:278654 69/262 (26%)
pde8bXP_009293455.1 PDE8 1..47 CDD:285793
TIM_phosphate_binding <143..>212 CDD:304361 15/102 (15%)
PAS_9 260..357 CDD:290162 14/100 (14%)
PAS 264..357 CDD:238075 12/96 (13%)
PDEase_I 597..850 CDD:278654 67/257 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589313
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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