DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4d

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009302145.1 Gene:pde4d / 566998 ZFINID:ZDB-GENE-081105-16 Length:769 Species:Danio rerio


Alignment Length:856 Identity:177/856 - (20%)
Similarity:317/856 - (37%) Gaps:227/856 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   454 GLKKCLVSKLFDVCPRSTVEEMEQQDEVRVAWGTGIAGH------VAESGEPVNIP--------- 503
            ||.:.||..|        .|.:.||:..|        ||      ::....|.|.|         
Zfish    23 GLNEDLVKIL--------RENLLQQERPR--------GHRRSPSSISPRLSPRNSPRLLRRMLLN 71

  Fly   504 -DAYQDERF----NC-EIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKMNGECF---SEIDEK 559
             :.::..||    .| ::|:.|......|  .|:......:|..|..::....|.|   |:.|  
Zfish    72 NNIHKQRRFTVAHTCFDVDNGTSSGRSPL--DPMASPGSGLILQANFVHSQRRESFLYRSDSD-- 132

  Fly   560 VFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQR 624
                              |:.|...:.||              |:|...:     |...:|....
Zfish   133 ------------------YDLSPKSMSRN--------------SSIASDI-----HGDDMIVTPF 160

  Fly   625 VQILLVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYE 689
            .|:|......:.:|:.:     .::.:|.:.::.||..:..||.           :|.....||:
Zfish   161 AQVLASLRTVRNNFAAL-----TNVQQERSNNKRSPMCNPPPIT-----------KTSYTEEAYQ 209

  Fly   690 D-------------DRFDA-----SVDENSCFKHRSIL------CMAIKNSLGQIIGVIQ--LIN 728
            .             |:.:.     ||.|.:..|.:.:|      ...:..|..|:...|.  .::
Zfish   210 KLATETLEELDWCLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSEMSRSGNQVSEYISSTFLD 274

  Fly   729 KFNELDF-----TKNDENFVEAFAIFCGMG--IHNTHMYEKAIVAMAKQSVTLEVLSYHASATMD 786
            |.||::.     .|:.|......:...|:.  .|::.:....|.....::.|.:.|    :..::
Zfish   275 KQNEVEMPSPQSQKDKEKKKRPMSQISGVKKLTHSSSLTNSNIPRFGVKTETEDEL----AKELE 335

  Fly   787 EAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACL-RMFLDLDFVERFHIDYEVLCRWLLSV 850
            :.::           :.|:.||..:  |..:..|...: .:|.:.|.::.|.|..:....:|:::
Zfish   336 DVNK-----------WGLNVFKVSE--FSGNRPLTVMMYTIFQERDLLKTFKIPLDTFITYLMTL 387

  Fly   851 KKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIK 914
            :.:|. :|.|||..||.:|.|....:|:|.....:|.::|.||.|.....||:||.|.:|.|.|.
Zfish   388 EDHYHADVAYHNNIHAADVTQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLIN 452

  Fly   915 ASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKK 978
            .:|.||.:|: :|.:|:||......:|......|..||:......:.:::.|.:|:||::.:...
Zfish   453 TNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNL 517

  Fly   979 RGPF--LESVSQPTSYWV------AEEPRALLRAMSMTVC-DLSAITKPWEIEKRVADLVSSEFF 1034
            ....  :....:.||..|      ::..:.|   .:|..| |||..|||.::.::..|.:..|||
Zfish   518 LADLKTMVETKKVTSSGVLLLDNYSDRIQVL---QNMVHCADLSNPTKPLQLYRQWTDRIMEEFF 579

  Fly  1035 EQGDMEKQE-LNITPI-DIMNREKEDELPMMQVNFIDSICLPIYEAFATL-SDKLEPLVEGVRDN 1096
            .|||.|::. :.|:|: |..|...|..    ||.|||.|..|::|.:|.| ....:.:::.:.||
Zfish   580 SQGDRERERGMEISPMCDKHNASVEKS----QVGFIDYIVHPLWETWADLVHPDAQDILDTLEDN 640

  Fly  1097 RGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEKASVNGS 1161
            | .|.        :::..|.|                                 ||:...|..|.
Zfish   641 R-EWY--------QSTIPQSP---------------------------------SPALDTSSEGR 663

  Fly  1162 NVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADDVDEQAAEENGHDAEVDEASCRSNST-CS 1225
            ..|.......:         .|...|.::|.:.|:....|:..||.    |.:|.||..:.| |:
Zfish   664 RAAGQEKFQFE---------LTLEEDGESDTEKDSGSPPEEDEEEE----EEEENSCSDSKTLCT 715

  Fly  1226 SSTASSCLSTP 1236
            ..  |.|...|
Zfish   716 QD--SECTEIP 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 28/151 (19%)
GAF 611..762 CDD:214500 29/183 (16%)
PDEase_I 859..1094 CDD:278654 73/247 (30%)
pde4dXP_009302145.1 PDEase_I 397..634 CDD:306695 73/243 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589312
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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