DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4ca

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009296827.1 Gene:pde4ca / 565259 ZFINID:ZDB-GENE-070912-373 Length:742 Species:Danio rerio


Alignment Length:404 Identity:103/404 - (25%)
Similarity:185/404 - (45%) Gaps:45/404 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 FLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIEC 890
            |.:.|.::.|.|..:....::.::::||| :|.|||..||.:|.|....:|:|.....:|.::|.
Zfish   340 FQERDLLKSFKIPVDTFINYMTALEENYRSDVAYHNSIHAADVVQSTHVLLSTPALEAVFTDLEI 404

  Fly   891 LALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSD 954
            ||.:.....||:||.|.:|.|.|..:|.||.:|: :|.:|:||......:|......|..||:..
Zfish   405 LAAMFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKK 469

  Fly   955 DYCRVIRVLEDAILSTDLAVYFKKRGPF--LESVSQPTSYWV------AEEPRALLRAMSMTVC- 1010
            ....:.:::.|.:|:||::.:.......  :....:.||..|      ::..:.|   .:|..| 
Zfish   470 QRQSLRKMVIDMVLATDMSKHMNLLADLKTMVETKKVTSLGVLLLDNYSDRIQVL---QNMVHCA 531

  Fly  1011 DLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE-LNITPI-DIMNREKEDELPMMQVNFIDSICL 1073
            |||..|||.|:.::..|.:..|||.|||.|:.: :.|:|: |..|...|..    ||.|||.|..
Zfish   532 DLSNPTKPLELYRQWTDRIMVEFFTQGDRERDKGMEISPMCDKHNASIEKS----QVGFIDYIVH 592

  Fly  1074 PIYEAFATL-SDKLEPLVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKAMSD 1137
            |::|.:|.| ....:.:::.:.|||..:..:.....|.|     ||::.....:.:.|...|.:.
Zfish   593 PLWETWADLVHPDAQEILDTLEDNREWYQSMIPHSPTST-----PEDKSAVMGMGAMGGGIASAG 652

  Fly  1138 DD-----VAASEAEVAVDSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQ------------- 1184
            |.     ....|.|..|:||.::...:.:..::.:....|:.:.|:...|.:             
Zfish   653 DKFQFELTLEEEGESDVESPVDEDLTSSTRDSSRTDPQGKQTSPAARLLSARSPGCRTMSFKMGE 717

  Fly  1185 -PSDDDNDVDADAD 1197
             |..:|.|.:.|.:
Zfish   718 PPDSEDEDKELDQE 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500
PDEase_I 859..1094 CDD:278654 73/247 (30%)
pde4caXP_009296827.1 PDEase_I 373..610 CDD:306695 73/243 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589310
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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