DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and si:dkey-219c10.4

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_017213373.2 Gene:si:dkey-219c10.4 / 562357 ZFINID:ZDB-GENE-081105-151 Length:529 Species:Danio rerio


Alignment Length:544 Identity:136/544 - (25%)
Similarity:226/544 - (41%) Gaps:123/544 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   660 PYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQIIGVI 724
            |.::.|||               :.|.....|.|.|:.:...    ..||  .:.|:.|.||.:.
Zfish    14 PEQAEFPI---------------DCPAQDVKDLFRAAAEAGP----HDIL--KLYNTKGNIINIS 57

  Fly   725 QLINKFNELDFTKNDENFVEAFAIFC-----------GMGIHNTHMYEKAIVAMAKQSVT----- 773
            ..:...:...:.|     :|..|..|           .:|...|.| ||.:.::.|:.:|     
Zfish    58 PQLASNSPHSYYK-----LEVVAADCNSELLGSELAVALGFDLTSM-EKRLQSLEKRILTEAAET 116

  Fly   774 --------------------LEVLS------------------YHASA---TMDEAHRLRR---- 793
                                :|.||                  ||...   |.:|...:|.    
Zfish   117 PAIVYEMKRQVESFREKLESVEHLSWLGLFKDMSEGTHKPSPFYHKRTLRKTREECEHVREKFLQ 181

  Fly   794 ---LRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYR 855
               |.|...|...|....||:..:||.:.:.....|:.||||:..|:|:.:||.::|..|.:.|.
Zfish   182 MSSLEVSEEVRQYLKTPTFDNWQWEDAEIMVLLQVMYTDLDFISTFNIEPDVLQQFLYEVYRRYN 246

  Fly   856 NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLA 920
            |:.:||::|.|.|.|||:.::..|........|:.|.::...:||||||.|.||::||.|.:.||
Zfish   247 NIPFHNFKHCFCVTQMMYGLIWLTDLRSKIDSIDLLIMLTSAVCHDLDHTGYNNAYQINARTELA 311

  Fly   921 QLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVY------FKK 978
            ..|: .|.:|:||......||....:.|..||.::.|.|:...:...||:||::.:      ||.
Zfish   312 LRYNDISPLENHHCAVAFEILEKTESNIFRNLPTEQYKRIREGIIKCILATDMSRHTDILNKFKA 376

  Fly   979 RGPFLESVSQPTSYWVAEEPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE 1043
            ..|..:        :..::.|.:|..:.:.|.|:|...:|.::.:...|.:..|||.|.||||.|
Zfish   377 ILPVFD--------FGNKDHRDVLMMIMIKVSDISNEARPMDVAEPWLDCLLQEFFNQSDMEKLE 433

  Fly  1044 -LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEP-LVEGVRDNRGHWIDLADV 1106
             |.:||  .|:|:|..: |..|..||..:..|::...|.|...||. :::.||....::.::...
Zfish   434 GLPVTP--FMDRDKVTK-PSSQTGFIRFVLFPLFIELANLFPCLEQHIIDPVRKALDYYTEMEKA 495

  Fly  1107 VK------------TKTSQDQEPE 1118
            ::            .|||..:||:
Zfish   496 LEREKQNRALNETTVKTSTSKEPD 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 21/112 (19%)
PDEase_I 859..1094 CDD:278654 75/243 (31%)
si:dkey-219c10.4XP_017213373.2 PDEase_I 250..478 CDD:306695 75/238 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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