DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde6b

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_685002.1 Gene:pde6b / 559332 ZFINID:ZDB-GENE-090421-2 Length:854 Species:Danio rerio


Alignment Length:846 Identity:252/846 - (29%)
Similarity:428/846 - (50%) Gaps:109/846 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 SRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKC 458
            |..|:..::|..:.::|:.|:...:.:..:..|||:.:|.|::|||.|||:.:.|    :|:.: 
Zfish    47 SFKEIVSVEEGAIFYDLITDMQENVNMEKVIFKILKRISALIHADRCSLFMYRQR----NGIAE- 106

  Fly   459 LVSKLFDVCPRSTVEE--MEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGY 521
            |.::||:|...|.:::  :....|:......||.||||::.:.||:.|..||..|:..:|.||.|
Zfish   107 LATRLFNVNKDSELDDCVVAPDSEIVFPLDIGIVGHVAQTKKQVNVKDVTQDSHFSTFVDELTEY 171

  Fly   522 RTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQL--- 583
            .|..||..||.:.. ||:.|...:||..|..|::.|..:|..||:   :|..|.:::..|.|   
Zfish   172 TTHNLLAAPIMNGK-DVVAVIMAVNKTTGPHFTDEDMDLFLKYLK---VGSLNLKIFHLSYLHNC 232

  Fly   584 EIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQI----------------LLVHE 632
            |.::.|:||..|..:|||.:.||....:.|..:::.:.|.|..:                :|:.|
Zfish   233 ETRKGQLLLWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDIWPVLMGE 297

  Fly   633 ADKGS-----------FSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPN 686
            ....|           |.:|.|:..:  .:|:.....:|....:.:..|:..:||.:|...|:.|
Zfish   298 QPPYSGPVTPDGREIIFYKVIDYILH--GKEDIKVIPNPTADHWALASGLPTYVAESGFICNIMN 360

  Fly   687 AYEDD--RFDASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIF 749
            |..::  :|.....::|.:..:::|.:.|.|...:|:||....|:.:...|.::||..:||...|
Zfish   361 AASEEMFKFQTEALDDSGWTIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDEHDEQLMEALTQF 425

  Fly   750 CGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLR------------------- 795
            .|....||..|:|......::.:..:::.||.....||...:.:.|                   
Zfish   426 LGWSALNTDTYDKMNKLENRKDIAQDMVLYHVKCRDDEIQDILKTREYFDREPRDCEEEELLEIL 490

  Fly   796 ---VPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNV 857
               :|....|.::.|.|.|....:...:...::|:.::..|::|.:..|||.|::.||.|.||.:
Zfish   491 KKELPGPKKFEIYAFHFSDFDCTELQLVMCGIQMYYEVGVVKKFQVPQEVLVRFMYSVSKGYRRI 555

  Fly   858 TYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQL 922
            |||||||.|||.|.||.:|||.:..:.:.::|.:|:|.....||:|||||||.:|:|:.:|||:|
Zfish   556 TYHNWRHGFNVGQTMFTLLTTGKLKQYYTDLEVMAMITAGFLHDIDHRGTNNLYQVKSQNPLAKL 620

  Fly   923 YSTSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVS 987
            :.:|.:|.||.:....:|......|..||:......|..:::.||::||||:|||||..|.:.|.
Zfish   621 HGSSILERHHLEFGKFLLGEESLNIFQNLNRRQTEHVFHLIDIAIIATDLALYFKKRTMFQKIVD 685

  Fly   988 QPTSY-----WV----AEEPR-ALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQ 1042
            ...:|     |:    .|..| .::.||.||.|||||||||||::.:||..|::||:||||:|:.
Zfish   686 LSETYEERKKWIDFMSLETTRKEIVMAMMMTACDLSAITKPWEVQSKVALSVAAEFWEQGDLERT 750

  Fly  1043 ELNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDLADVV 1107
            .|...||.:|:|.|..|||.:|..|||.:|..:|:.|:....:::|:.:|:.:||.||       
Zfish   751 VLEQQPIPMMDRNKAAELPKLQCGFIDFVCTFVYKEFSRFHPEIKPMFDGILNNRMHW------- 808

  Fly  1108 KTKTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEKASVNGSNVANNSSNTNK 1172
                   :|.:||.:.:       .|||          |.||.:..|.|:.|.:| :|::..:..
Zfish   809 -------KERQEEYEAK-------LKAM----------EEAVKARQEAAAKNAAN-SNSTGGSGS 848

  Fly  1173 K 1173
            |
Zfish   849 K 849

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 53/163 (33%)
GAF 611..762 CDD:214500 37/179 (21%)
PDEase_I 859..1094 CDD:278654 102/244 (42%)
pde6bXP_685002.1 GAF 72..210 CDD:214500 48/143 (34%)
GAF 253..440 CDD:214500 40/188 (21%)
PDEase_I 557..801 CDD:278654 101/243 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589302
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

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