DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4bb

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_009296519.1 Gene:pde4bb / 555599 ZFINID:ZDB-GENE-070912-454 Length:707 Species:Danio rerio


Alignment Length:690 Identity:148/690 - (21%)
Similarity:263/690 - (38%) Gaps:155/690 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   516 DSLTGYRTKALLCMP----IKDSSGDVIGVAQVINKMNGECF---SEIDEKVFSSYLQFCGIGLR 573
            |||......::.|.|    :..:||.::..:...:....|.|   |:.|                
Zfish    87 DSLEVENGPSIGCSPLDLQVSPASGLILHPSMASHSQRRESFLYRSDSD---------------- 135

  Fly   574 NAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSF 638
                |:.|.....||..|:.       ||           .|.:.||.....|:|......:.:|
Zfish   136 ----YDLSPKSTSRNSSLVG-------EQ-----------LHGEDLIVTPFAQVLASLRTVRNNF 178

  Fly   639 SRVFDFEANDLSEEEATSRTSPYESRFPI---NIGITGHVATTGETVNVPNAYEDDRFDASVDEN 700
            |.:.:...       .:|:.||..|..|:   |:....:.....||:        :..|..:|:.
Zfish   179 SILTNVSC-------PSSKRSPISSHGPVTKANLSDESYQKLALETM--------EELDWCLDQL 228

  Fly   701 SCFK-HRSILCMAIKNSLGQIIGVIQLINKFNEL---DFTKNDE-----NFVEAFAIFCGMGIHN 756
            ...: :||:..||              .|||..:   :.|...|     |.|..|       |.|
Zfish   229 ETIQTYRSVSDMA--------------SNKFKRMLNRELTHLSEMSRSGNQVSEF-------ISN 272

  Fly   757 THMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLK 821
            |.:.::..:.:...:.............|.:...:|::...|.........:| .:..:.:|.|.
Zfish   273 TFLDKQNELEIPLSTPKSRERKKRQQQLMTQISGVRKVTHGSGPSSSCSTTRF-GVKTDSEDMLS 336

  Fly   822 -------------------------ACL--RMFLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVT 858
                                     ||:  .:|.:.|.::.|.|..:....::::::.:|. :|.
Zfish   337 KDLEDINKWGLNIFKVAEHSHHRPLACIMYAIFQERDLMKTFKIPVDTFVTYMMTLEDHYHADVA 401

  Fly   859 YHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLY 923
            |||..||.:|||....:|:|.....:|.::|.||.:.....||:||.|.:|.|.|..:|.||.:|
Zfish   402 YHNSLHAADVAQSTHILLSTPALDAVFTDLEILAALFAAAIHDVDHPGVSNQFLINTNSELALMY 466

  Fly   924 S-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPF--LES 985
            : .|.:|:||......:|......:..|||..:...:.:::...:|:||::.:.......  :..
Zfish   467 NDESVLENHHLAVGFKLLQGENCDLFQNLSKKERQTLRKMVIHMVLATDMSKHMSLLADLKTMVE 531

  Fly   986 VSQPTSYWVA-----EEPRALLRAMSMTVC-DLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE- 1043
            ..:.||..|.     .:...:||  :|..| |||..|||.::.|:..|.:..|||.|||.|::. 
Zfish   532 TKKVTSSGVLLLDNYTDRIQVLR--NMVHCADLSNPTKPLDLYKQWTDRIMQEFFHQGDRERERG 594

  Fly  1044 LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATL-SDKLEPLVEGVRDNRGHW------- 1100
            :.|:|   |..:....:...||.|||.|..|::|.:|.| ....:.:::.:.:|| :|       
Zfish   595 MEISP---MCDKHTASVEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENR-NWYYSMIPQ 655

  Fly  1101 ------IDLADVVKTKTSQDQEPEE--EQQQQNVISNGDC 1132
                  .:.......|...:.|.||  :|..:| :|..||
Zfish   656 SPSPPFFEAGSPSGDKFQFELEVEEGAKQDTKN-LSKTDC 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 12/72 (17%)
GAF 611..762 CDD:214500 32/162 (20%)
PDEase_I 859..1094 CDD:278654 72/245 (29%)
pde4bbXP_009296519.1 PDEase_I 402..643 CDD:278654 72/245 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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