DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and PDE4D

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001098101.1 Gene:PDE4D / 5144 HGNCID:8783 Length:809 Species:Homo sapiens


Alignment Length:1012 Identity:212/1012 - (20%)
Similarity:367/1012 - (36%) Gaps:296/1012 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 PMDNGSVGGSCSNLQNVGGVV--AGQYQYNHQQHH------------HNHAHLHHSQHSHYQ--- 344
            |...||..||    .:.||..  |.::.:.|:|||            |.|.||........|   
Human     9 PARAGSGEGS----DSAGGATLKAPKHLWRHEQHHQYPLRQPQFRLLHPHHHLPPPPPPSPQPQP 69

  Fly   345 ------------------AGGAVGS-SSLGSTGGASGAGGAPSLGGSGGAGNGHQYPYYHCHQRP 390
                              .|.|.|. :|.|:||.....|.:.:          .:|.|       
Human    70 QCPLQPPPPPPLPPPPPPPGAARGRYASSGATGRVRHRGYSDT----------ERYLY------- 117

  Fly   391 QRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGL 455
                                    |..:                   ||.|..:..|.   ..||
Human   118 ------------------------CRAM-------------------DRTSYAVETGH---RPGL 136

  Fly   456 KKCLVS--------KLFDV-----CPRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQ 507
            ||..:|        :.|||     ..||.::.|...       |:|:   :.::    |...:.:
Human   137 KKSRMSWPSSFQGLRRFDVDNGTSAGRSPLDPMTSP-------GSGL---ILQA----NFVHSQR 187

  Fly   508 DERFNCEIDSLTGYRTKALLCMPIKDSS------GD---VIGVAQVINKM-----NGECFSEIDE 558
            .|.|....||......|::    .::||      ||   |...|||:..:     |....:.:.:
Human   188 RESFLYRSDSDYDLSPKSM----SRNSSIASDIHGDDLIVTPFAQVLASLRTVRNNFAALTNLQD 248

  Fly   559 KVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQ 623
            :..|.....|            :|..|.:..:..:..:.:..|  |:|.:.:       .|.|.:
Human   249 RAPSKRSPMC------------NQPSINKATITEEAYQKLASE--TLEELDW-------CLDQLE 292

  Fly   624 RVQIL-LVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNA 687
            .:|.. .|.|.....|.|:.:.|...|||   .||:....|.|     |:.........|.:|:.
Human   293 TLQTRHSVSEMASNKFKRMLNRELTHLSE---MSRSGNQVSEF-----ISNTFLDKQHEVEIPSP 349

  Fly   688 YEDDRFDASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGM 752
            .:.:            |.:.      |..:.||.||.:|                          
Human   350 TQKE------------KEKK------KRPMSQISGVKKL-------------------------- 370

  Fly   753 GIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDD 817
             :|::.:...:|.....::...:||    :..:::.::           :.||.|:..::  ..:
Human   371 -MHSSSLTNSSIPRFGVKTEQEDVL----AKELEDVNK-----------WGLHVFRIAEL--SGN 417

  Fly   818 DTLKACLR-MFLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQ 880
            ..|...:. :|.:.|.::.|.|..:.|..:|::::.:|. :|.|||..||.:|.|....:|:|..
Human   418 RPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPA 482

  Fly   881 WWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPG 944
            ...:|.::|.||.|.....||:||.|.:|.|.|..:|.||.:|: :|.:|:||......:|....
Human   483 LEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEEN 547

  Fly   945 NQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPF--LESVSQPTSYWV------AEEPRAL 1001
            ..|..||:......:.:::.|.:|:||::.:.......  :....:.||..|      ::..:.|
Human   548 CDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVL 612

  Fly  1002 LRAMSMTVC-DLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE-LNITPI-DIMNREKEDELPMM 1063
               .:|..| |||..|||.::.::..|.:..|||.|||.|::. :.|:|: |..|...|..    
Human   613 ---QNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCDKHNASVEKS---- 670

  Fly  1064 QVNFIDSICLPIYEAFATL-SDKLEPLVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVI 1127
            ||.|||.|..|::|.:|.| ....:.:::.:.||| .|.. :.:.::.:....:|||.:|.|.  
Human   671 QVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNR-EWYQ-STIPQSPSPAPDDPEEGRQGQT-- 731

  Fly  1128 SNGDCKAMSDDDVAASEAEVAVDSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQ-PSDDDND 1191
                       :....|..:..|..|:....:||.|..::|.::.|........||: |      
Human   732 -----------EKFQFELTLEEDGESDTEKDSGSQVEEDTSCSDSKTLCTQDSESTEIP------ 779

  Fly  1192 VDADADDVDEQAAEEN-GHDAEVDEASC----RSNST 1223
                   :|||..||. |.:.|....:|    ||..|
Human   780 -------LDEQVEEEAVGEEEESQPEACVIDDRSPDT 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 34/188 (18%)
GAF 611..762 CDD:214500 26/151 (17%)
PDEase_I 859..1094 CDD:278654 73/247 (30%)
PDE4DNP_001098101.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..107 24/101 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..364 4/38 (11%)
PDEase_I 461..702 CDD:278654 73/247 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..729 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 739..809 20/82 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154159
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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