DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and PDE3B

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001350499.1 Gene:PDE3B / 5140 HGNCID:8779 Length:1190 Species:Homo sapiens


Alignment Length:1020 Identity:202/1020 - (19%)
Similarity:343/1020 - (33%) Gaps:323/1020 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 SCSNLQNVGGVVAGQYQYNH-QQHHHNHAHLHHSQHSHY-QAGGAVGSSSLGSTGGASGAGGAPS 368
            ||.:|::       .:.|.| ..|..|...|......|. |||..:.:|....|..:..||    
Human   365 SCLSLRS-------SWDYRHVPPHLANFVFLVEMGFLHVGQAGLELPTSGDLPTSASQSAG---- 418

  Fly   369 LGGSGGAGNGHQYPYYHCHQRPQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSI 433
            :.|:.|.|||                 .:|..|:|..   .:|.|:..:..:.......|:::|.
Human   419 ITGNSGGGNG-----------------VDLSVLNEAR---NMVSDLLTDPSLPPQVISSLRSISS 463

  Fly   434 LLNADRGSLFLVQGRCN---GP----DGLKKCLVSKLFDVCPRSTVEEMEQQDEVRVAWGTGIAG 491
            |:.|..||       |.   .|    .|...|           |.:|:                 
Human   464 LMGAFSGS-------CRPKINPLTPFPGFYPC-----------SEIED----------------- 493

  Fly   492 HVAESGEPVNIPDAYQDERFNCEIDSLTGYRTKALLCMPIKDSSG--DVIGVAQVI--NKMNGEC 552
             .||.|          |.:.|      .|....:|....::.|||  .::.|.|..  ::.||: 
Human   494 -PAEKG----------DRKLN------KGLNRNSLPTPQLRRSSGTSGLLPVEQSSRWDRNNGK- 540

  Fly   553 FSEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQ 617
                     ..:.:|   |:.:...|    |....|..||.:.:   :..|::.      |||..
Human   541 ---------RPHQEF---GISSQGCY----LNGPFNSNLLTIPK---QRSSSVS------LTHHV 580

  Fly   618 SLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVA-----T 677
            .|   :|..:|       .|.|.|.......:|....|:| ||.|  ||.........:     :
Human   581 GL---RRAGVL-------SSLSPVNSSNHGPVSTGSLTNR-SPIE--FPDTADFLNKPSVILQRS 632

  Fly   678 TGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLG-QIIGVIQLINKFNELDFTK---- 737
            .|...|.|:.|:..|   :.|.|.|            ||.| |::..:..    :|.|.|.    
Human   633 LGNAPNTPDFYQQLR---NSDSNLC------------NSCGHQMLKYVST----SESDGTDCCSG 678

  Fly   738 ---NDENFV--EAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVP 797
               .:||..  |:|.:.      .|...|:     .::..:.::.........:||...::..:.
Human   679 KSGEEENIFSKESFKLM------ETQQEEE-----TEKKDSRKLFQEGDKWLTEEAQSEQQTNIE 732

  Fly   798 SAVHFRLHDFKFDDIHFEDDDTL---------------------------KACLRMFLDLDFVER 835
            ..|       ..|.|..|:.|:|                           :....:|.|...:|.
Human   733 QEV-------SLDLILVEEYDSLIEKMSNWNFPIFELVEKMGEKSGRILSQVMYTLFQDTGLLEI 790

  Fly   836 FHIDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILT------------------TTQWW 882
            |.|..:....:..:::..||::.|||..||.:|...::.:.|                  |....
Human   791 FKIPTQQFMNYFRALENGYRDIPYHNRIHATDVLHAVWYLTTRPVPGLQQIHNGCGTGNETDSDG 855

  Fly   883 KI-------------------FG-------EIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQ 921
            :|                   :|       .:|.:||.:....||.||.|..|:|.:..::|.|.
Human   856 RINHGRIAYISSKSCSNPDESYGCLSSNIPALELMALYVAAAMHDYDHPGRTNAFLVATNAPQAV 920

  Fly   922 LYS-TSTMEHHHFDQCL-MILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLE 984
            ||: .|.:|:||..... :.|:.|....|.:|...::.|...::.:|||:|||..:|.....|..
Human   921 LYNDRSVLENHHAASAWNLYLSRPEYNFLLHLDHVEFKRFRFLVIEAILATDLKKHFDFLAEFNA 985

  Fly   985 SVSQPTS---YWVAEEPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNI 1046
            ..:...|   .|..|..|.|:..:.:.:.|::...|..::..:..:.:.:||:||||   :|.|:
Human   986 KANDVNSNGIEWSNENDRLLVCQVCIKLADINGPAKVRDLHLKWTEGIVNEFYEQGD---EEANL 1047

  Fly  1047 -TPIDIMNREKEDELPMMQVNFIDSICLPI---YEAFATLSDKLEPLVEGVRDNRGHWIDLADVV 1107
             .||.........:|..:|.:||..|..|:   |:|...|.              |.|::..:..
Human  1048 GLPISPFMDRSSPQLAKLQESFITHIVGPLCNSYDAAGLLP--------------GQWLEAEEDN 1098

  Fly  1108 KTKTSQDQEPEEEQQQQNVISNG--------------DCKAMSDDDVAASE-----AEVAVDSPS 1153
            .|::..|::.||...:...:.|.              .|:.|..    .:|     .|:..:...
Human  1099 DTESGDDEDGEELDTEDEEMENNLNPKPPRRKSRRRIFCQLMHH----LTENHKIWKEIVEEEEK 1159

  Fly  1154 EKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADD 1198
            .||..|...|.|                |:.|..|:..|..:||:
Human  1160 CKADGNKLQVEN----------------SSLPQADEIQVIEEADE 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 29/172 (17%)
GAF 611..762 CDD:214500 37/165 (22%)
PDEase_I 859..1094 CDD:278654 67/287 (23%)
PDE3BNP_001350499.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
Interaction with RAPGEF3. /evidence=ECO:0000269|PubMed:21393242 1..25
DUF1109 136..>282 CDD:310850
PDEase_I 814..1088 CDD:306695 66/276 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154155
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.850

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