DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and Pde6

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001262566.1 Gene:Pde6 / 41760 FlyBaseID:FBgn0038237 Length:1124 Species:Drosophila melanogaster


Alignment Length:1268 Identity:457/1268 - (36%)
Similarity:636/1268 - (50%) Gaps:253/1268 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 PAHYQPLNHSGAAPPSSS------NGS-----SSSGGGVQTSATP---------QQQQQYQVQQP 170
            |......:.|.||..|:|      ||:     |::.|||...|.|         ......||:  
  Fly    14 PVEMSTTSSSSAATTSASSSKPLTNGANKTAISTAAGGVTPGAVPGPGSGAIPASSSSGNQVK-- 76

  Fly   171 YQYQYQHHYHHQANSPQHHRPYDPEHARMEAWLDENQEFVQDYFIRKATRQTVDAWLVSHATSAG 235
                 ..|:|.|:|   ::||                         ..|.::.:..|:: .|.:.
  Fly    77 -----LEHHHRQSN---NNRP-------------------------AVTNRSSETKLMT-PTGSS 107

  Fly   236 NDVVSSTSPTHANGQTSSSRGG--SGATTPVRKISAHEFERGGLLKPIVNTIDGTPTFLSIGPPM 298
            :....|.|.|.|:.||.:|:..  :.|:|...:....|..|....||     :....:|:...|.
  Fly   108 SSPSQSPSQTQASIQTQTSQQDRLAKASTTASQQDVDEVARLFEEKP-----EAFEKWLTERAPP 167

  Fly   299 DNGSVGGSCSNLQNVGGVVAGQYQYNHQQHHHNHAHLHHSQHSHYQAGGAVGSSSLGSTGGASGA 363
            :      :.|.||          ::...:..|....:.......:.|...........:...|.|
  Fly   168 E------ALSRLQ----------EFIENRKPHKRPSVTSDLFQQWMAASPTVQQKSPRSLSNSSA 216

  Fly   364 GGAPSLGGSGGAGNGHQYPYYHCHQRPQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKIL 428
            ...|                 .|        |..|..|||.||..||::|:.|||::..||||||
  Fly   217 SSLP-----------------EC--------RRHLMDLDEGELFMELIRDVANELDIDVLCHKIL 256

  Fly   429 QNVSILLNADRGSLFLVQGRCNGPDGLKKCLVSKLFDVCPRSTVEE---MEQQDEVRVAWGTGIA 490
            .||.:|.:||||||||.:|     ....|.||:|||||..::.:::   ....:|:.:.:|.|||
  Fly   257 VNVGLLTHADRGSLFLAKG-----TPTNKYLVAKLFDVTQKTALKDAVTRASAEEIIIPFGIGIA 316

  Fly   491 GHVAESGEPVNIPDAYQDERFNCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKMNGEC--F 553
            |.||::.:.:||.:||:|.|||||||..|||:|.|:|||||.:..||:|||||:|||.|| |  |
  Fly   317 GMVAQTKQMINIKEAYKDARFNCEIDLKTGYKTNAILCMPICNYEGDIIGVAQIINKTNG-CMEF 380

  Fly   554 SEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQS 618
            .|.|.::|..||.|||||::||||:|.|..|.:|||:||:|||.|||||:.:|.:|.:|:|..:.
  Fly   381 DEHDVEIFRRYLTFCGIGIQNAQLFEMSVQEYRRNQILLNLARSIFEEQNNLECLVTKIMTEARE 445

  Fly   619 LIQCQRVQILLV-------------------------HEAD-------KGSFSRVF----DFEAN 647
            |::|:|..:.||                         ..||       :..|:.:|    :::|.
  Fly   446 LLKCERCSVFLVDLDCCEASHLEKIIEKPNQPATRAIKSADSFEEKKMRNRFTVLFELGGEYQAA 510

  Fly   648 DLSE---EEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYE----------DDRFDASVDE 699
            ::|.   .|.:|.|....::|         |||||:|||:.:..|          :|..|::   
  Fly   511 NVSRPSVSELSSSTLAQIAQF---------VATTGQTVNICDVIEWVRDHNQIRAEDEIDST--- 563

  Fly   700 NSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAI 764
                  ::||||.|.|:..::|||.|||||.|.:.||.:|.:..||||||||:|||||.|||.|.
  Fly   564 ------QAILCMPIMNAQKKVIGVAQLINKANGVPFTDSDASIFEAFAIFCGLGIHNTQMYENAC 622

  Fly   765 VAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLD 829
            ..||||.|.||.|||||:|:.|:..:|.:..:..|..:.|:.|.|.|....||||.:|.||||:.
  Fly   623 KLMAKQKVALECLSYHATASQDQTEKLTQDVIAEAESYNLYSFTFTDFELVDDDTCRAVLRMFMQ 687

  Fly   830 LDFVERFHIDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALI 894
            .:.|.:|.|.|:|||||:|||:||||.|.|||||||.||||.|||:|.|.:..:...::|.|.|:
  Fly   688 CNLVSQFQIPYDVLCRWVLSVRKNYRPVKYHNWRHALNVAQTMFAMLKTGKMERFMTDLEILGLL 752

  Fly   895 IGCLCHDLDHRGTNNSFQIKASSPLAQLYSTSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRV 959
            :.|||||||||||||:||.|..||||.||:||||||||||||:|||||.||.|...||.:||..|
  Fly   753 VACLCHDLDHRGTNNAFQTKTESPLAILYTTSTMEHHHFDQCVMILNSEGNNIFQALSPEDYRSV 817

  Fly   960 IRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEPRALLRAMSMTVCDLSAITKPWEIEKR 1024
            ::.:|.||||||||:|||||..|||.|......|..||.:.||..|.||.||:|||.||||::.:
  Fly   818 MKTVESAILSTDLAMYFKKRNAFLELVENGEFDWQGEEKKDLLCGMMMTACDVSAIAKPWEVQHK 882

  Fly  1025 VADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPL 1089
            ||.||:.|||:|||:||.:||..|:.:|:||::||||.|||.|||.||||:|.........:.||
  Fly   883 VAKLVADEFFDQGDLEKLQLNTQPVAMMDRERKDELPKMQVGFIDVICLPLYRVLCDTFPWITPL 947

  Fly  1090 VEGVRDNRGHWIDLADVVK---TKTSQD--QEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAV 1149
            .||..:||.:|.|||:.|:   |....|  .:|.||           ..|.:|:::...|..|..
  Fly   948 YEGTLENRRNWQDLAEKVEMGLTWIDHDTIDKPVEE-----------FAACADEEIKDIEFTVTT 1001

  Fly  1150 ------------DSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDVDADADDVDEQ 1202
                        ||.:.:...:||.::...:....| ||.|..:.|..:..|..           
  Fly  1002 LNCNQQSQHGSEDSHTPEHQRSGSRLSMKKTGALGK-AVRSKLSKTLYNSMDGS----------- 1054

  Fly  1203 AAEENGHDAEVDEASCRSNSTCSSSTASSCLSTPPPTGEDDSTPVSPLKTLQAKLVAANLNALQR 1267
                                  ...|:...|.:......||.:|.||.:. ||......::|...
  Fly  1055 ----------------------KPKTSLKLLESHVSEDMDDKSPTSPSQP-QASGSMGRMSASSS 1096

  Fly  1268 QTSNQAQ---TQKQRCKSCDHSRSGLQVRKTSS 1297
            .:|...|   ..|:|.|.|     .|. ||.|:
  Fly  1097 TSSAGGQMVDKSKKRSKLC-----ALLXRKPSN 1124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 85/166 (51%)
GAF 611..762 CDD:214500 61/199 (31%)
PDEase_I 859..1094 CDD:278654 138/234 (59%)
Pde6NP_001262566.1 GAF 247..406 CDD:214500 84/164 (51%)
GAF 431..619 CDD:214500 62/205 (30%)
PDEase_I 717..950 CDD:278654 136/232 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 216 1.000 Domainoid score I1562
eggNOG 1 0.900 - - E1_KOG3689
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D114875at33208
OrthoFinder 1 1.000 - - FOG0002593
OrthoInspector 1 1.000 - - mtm6603
orthoMCL 1 0.900 - - OOG6_100960
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.820

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