DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde10a

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_957396.2 Gene:pde10a / 394077 ZFINID:ZDB-GENE-040426-1115 Length:794 Species:Danio rerio


Alignment Length:764 Identity:252/764 - (32%)
Similarity:398/764 - (52%) Gaps:77/764 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 DEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNG------PDGLKKCLV 460
            |.|.|::||    ||.::..|             .||..:|:.: |.||.      |.|.|:.|.
Zfish   101 DNKLLLYEL----CNIIKTAT-------------KADGFALYFL-GECNNSLCLFTPTGAKEGLP 147

  Fly   461 SKLFDVCPRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGYRTKA 525
            .    :.|...           :.:||.||.|||::.:.:.:.|...||||.......:|.|..:
Zfish   148 G----LIPSGP-----------ITFGTTIAAHVAKTRKTLLVEDIMGDERFPHGTGQDSGIRVHS 197

  Fly   526 LLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQV 590
            :||:||..:.||:|.:.::...:..|.|:...::|.::.|.:..:.:...|:......:.:.|..
Zfish   198 VLCLPILTAIGDLIAILELHRHLGREPFNLSHQEVATANLAWASVAIHQVQVCRGLAKQTELNDF 262

  Fly   591 LLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEAT 655
            |||:::..|:....|:.::..|:.:.::|:...|..:..|...:|..:|.:||.  .:.:|.:..
Zfish   263 LLDVSKTYFDNIVAIDSLLEHIMIYAKNLVNADRCALFQVDHNNKELYSDLFDI--GEENEGKPV 325

  Fly   656 SRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQI 720
            .|.:. |.||.|..||.|.||.|||.:|:|:||.|.||:..||..:.:..|:||||.|. |.|.:
Zfish   326 FRKTK-EIRFSIEKGIAGQVARTGEVLNIPDAYADPRFNREVDLYTGYTTRNILCMPIV-SRGTV 388

  Fly   721 IGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATM 785
            |||:|::||.....|||.|||..:.||:||.:.:|..:||.:...:.....||:|.||||:..|.
Zfish   389 IGVVQMVNKLGGSAFTKTDENNFKMFAVFCALALHCANMYHRIRHSECIYRVTMEKLSYHSICTS 453

  Fly   786 DEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSV 850
            :|...|.:|.:|||::..:..|.||...||:   |...:.:::..:...:...:.|.|||:.:||
Zfish   454 EEWKTLTQLTLPSAIYKEIELFHFDIAPFEE---LWPAIFVYMVHNSCGKTSFELEKLCRFTMSV 515

  Fly   851 KKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKA 915
            :||||.|.||||:||..||..|:|||..|.  .||.|:|...|:|.||||||||||.:||:..|.
Zfish   516 RKNYRRVPYHNWKHAVTVAHCMYAILQKTT--GIFTELERKGLLIACLCHDLDHRGYSNSYLQKF 578

  Fly   916 SSPLAQLYSTSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRG 980
            ..|||.||||||||.|||.|.:.||.. |:.|.:||:|.:|.:|:.::..||::||||:||..|.
Zfish   579 DHPLAALYSTSTMEQHHFSQTVSILQE-GHNIFSNLTSGEYEQVLEIIRKAIIATDLALYFGNRK 642

  Fly   981 PFLESVSQPTSYWVAEEPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELN 1045
            ...|.:|...........|..:..:.||.|||.::||.|.:.:..|:.:.:||:.:|| |.:::.
Zfish   643 QLAELLSTGALDLNNRAHRDRVIGLMMTACDLCSVTKLWPVTRLTANDIYAEFWAEGD-EMKKIG 706

  Fly  1046 ITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDLADVVKTK 1110
            :.||.:|:|:|:||:|..||.|.:::.:|.|...:.|.....||:|..|:|...|          
Zfish   707 MQPISMMDRDKKDEVPQGQVGFYNAVAIPCYTTLSELFPPSVPLLEACRENLSQW---------- 761

  Fly  1111 TSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEKASVN 1159
                         :.::...|..|.|    :..||||:..|.|....|:
Zfish   762 -------------ERIVQGEDVSAWS----STEEAEVSETSDSGPVKVD 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500 38/167 (23%)
GAF 611..762 CDD:214500 58/150 (39%)
PDEase_I 859..1093 CDD:459723 99/233 (42%)
pde10aNP_957396.2 GAF <39..>259 CDD:441805 45/190 (24%)
GAF 277..432 CDD:214500 59/158 (37%)
PDEase_I 524..754 CDD:459723 99/233 (42%)

Return to query results.
Submit another query.