DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde6c

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_957165.1 Gene:pde6c / 393845 ZFINID:ZDB-GENE-040426-1664 Length:852 Species:Danio rerio


Alignment Length:807 Identity:264/807 - (32%)
Similarity:420/807 - (52%) Gaps:79/807 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 SRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKC 458
            |..::.|:.|..::|::::|:.::..:....||:||.:.:|:||||.|.|:.:.| ||...|..|
Zfish    46 SFKDVTQVQEAAILFDMIQDMHSQPVMEKAMHKVLQRICLLVNADRCSYFIARAR-NGIPELATC 109

  Fly   459 LVSKLFDVCPRSTVEE--MEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGY 521
                ||||.|.|..|.  :..|.|:.....|||.|.:..:.:|.|:||..|:.||:..:|..|||
Zfish   110 ----LFDVTPTSKYEANLVNPQSEIVFPTDTGIVGQIVTTKKPANVPDVKQNPRFSDFVDKQTGY 170

  Fly   522 RTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCG-IGLRNAQLYEKSQLEI 585
            .||.::..|:.... |.:||...|||:....||:.||.|||.|:.|.. |.|::...| ...:|.
Zfish   171 TTKNMMAAPLMQGK-DPLGVVMAINKVGANEFSKEDEDVFSKYIIFATVIALQHYTNY-MYNVES 233

  Fly   586 KRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVH------------------E 632
            :|:||||..|..:|||.:.||....:.|..:::.:||:|....|:.                  |
Zfish   234 RRSQVLLWSASKVFEELTDIERQFHKALYTVRTYLQCERYSCGLLDMTKEKEFYDEWPIKLGDVE 298

  Fly   633 ADKGS---------FSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAY 688
            ..||.         |.::.|:...  .:||.....:|....:.:..|:..:||..|...|:.|..
Zfish   299 PYKGPKTPDGREIIFYKIIDYLLE--GKEEIKVIPNPPADHWALVSGLPTYVAENGFICNMMNVA 361

  Fly   689 EDDRF---DASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFC 750
            .|:.|   ..:|||.. |..:::|.:.|.|...:|:||....|:.:...|.:.||...||...|.
Zfish   362 ADEYFTFQKEAVDETG-FVIKNVLSLPIVNKKEEIVGVATFFNRKDGKPFEEQDEQITEALTQFL 425

  Fly   751 GMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASAT----------------------MDEAHRLRR 793
            |..:.|...|:|......::.:..|::.|...||                      ..|.::|.|
Zfish   426 GWSVLNCDTYDKLNRMEWRKEIAEEMVMYQTKATPAEVQQILNTKEKFDQNPEDCDQKEMYKLLR 490

  Fly   794 LRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNVT 858
            ..:|.|....|.:|.|.|....:.|.:|..:|.|.:|..||:|.:..|||.||:.:|:|.||::|
Zfish   491 ANIPEAKDVDLLEFSFSDFPLTETDLIKCGIRCFFELGVVEKFKVPAEVLTRWMYTVRKGYRDIT 555

  Fly   859 YHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLY 923
            ||||||.|||.|.||.:|.|.:..:.:.:::..|::....|||:|||||||.:|.|::||||:|:
Zfish   556 YHNWRHGFNVGQTMFCLLQTGKLRRYYTDLDAFAMVAAAFCHDIDHRGTNNLYQTKSASPLAKLH 620

  Fly   924 STSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESV-- 986
            .:|.:|.||......::......|..:|....:..|..:.:..|::||||:|||||..|.:.|  
Zfish   621 GSSILERHHLQYSKNLMAEENVNIFQSLQKRQFETVQHLHDVCIIATDLALYFKKRTMFQKIVDA 685

  Fly   987 SQPTS------YWVAEEP--RALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE 1043
            ::|.:      ..||..|  :.::.||.||.|||||||||||::.:||.:|::||:||||:|:..
Zfish   686 TEPMTKEEEMVAHVANNPIRKEIIMAMMMTGCDLSAITKPWEVQSKVALMVAAEFWEQGDLERTV 750

  Fly  1044 LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDLADVVK 1108
            |:..||.:|:|.|.||||.||..|||.:|..:|:.|:....::.|:.:|:.:||.||.:|||:.:
Zfish   751 LDQQPIPMMDRNKSDELPKMQCGFIDFVCSFVYKEFSRFHKEITPMFDGLNNNRVHWKELADIYQ 815

  Fly  1109 TK----TSQDQEPEEEQQQQNVISNGD 1131
            .|    .::.:..||||.::.....|:
Zfish   816 AKIDAIANEKKRLEEEQAKKGGEEGGE 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 61/164 (37%)
GAF 611..762 CDD:214500 41/180 (23%)
PDEase_I 859..1094 CDD:278654 100/244 (41%)
pde6cNP_957165.1 GAF 72..224 CDD:214500 60/157 (38%)
GAF 252..439 CDD:214500 44/189 (23%)
PDEase_I 556..801 CDD:278654 100/244 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589293
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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