DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde6a

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001007161.1 Gene:pde6a / 368410 ZFINID:ZDB-GENE-030616-42 Length:858 Species:Danio rerio


Alignment Length:803 Identity:251/803 - (31%)
Similarity:423/803 - (52%) Gaps:73/803 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 SRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKC 458
            |.:||..::|.|:||::|:|:...|.:......:::::|.::.|||.|||:.:.|    :|:.: 
Zfish    49 SHHELSSMEECEIIFDMVRDMQENLHMERAVFNLMRHLSFMIRADRMSLFMYRQR----NGIAE- 108

  Fly   459 LVSKLFDVCPRSTVEE--MEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGY 521
            |.:::|:|...:|:||  :....|:.....|||.||||.:.:.||:||..:|..|:..:|:||.|
Zfish   109 LATRIFNVHKDATLEECLVPPDSEIVYPLDTGIVGHVATAKKTVNVPDVTKDSHFSDFVDNLTEY 173

  Fly   522 RTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIK 586
            .||.:|..||.:.. |::.|...:||:....|:..||:....||.|..:.||...|......|.:
Zfish   174 ETKNVLATPIMNGK-DMVAVMMAVNKIGAPHFTAQDEETLKKYLNFANLVLRVFHLSYLHNCETR 237

  Fly   587 RNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQI----------------LLVHEADK 635
            |.||||..|..:|||.:.||....:.|..:::.:.|.|..:                :|:.|...
Zfish   238 RGQVLLWSASKVFEELTDIERQFHKALYTVRAFLNCDRYSVGLLDMTKTKEFFDLWPVLMGEVPP 302

  Fly   636 GS-----------FSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYE 689
            .|           |.:|.|:..:  .:|:.....:|....:.:..|:..:||..|...|:.||.:
Zfish   303 YSGPKTPDGREVIFYKVIDYILH--GKEDIKVIPNPPADHWALVSGLPTYVAENGLICNIMNAAQ 365

  Fly   690 DDRFDASVD--ENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGM 752
            |:.|:...:  :.|.:..:::|.:.|.|...:|:||....|:.:...|.:.||..:|:...|.|.
Zfish   366 DEFFEFQKEPLDESGWMIKNVLSLPIVNKKEEIVGVATFYNRKDGKPFDEMDETLMESLTQFLGW 430

  Fly   753 GIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLR---------------------- 795
            .:.||..|:|......::.:..:::.||.....||...:...|                      
Zfish   431 SVLNTDTYDKMNKLENRKDIFQDMVMYHVKCRKDEIQNILNTREMYDKEPDECEEDELEDILNEV 495

  Fly   796 VPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNVTYH 860
            :|.:....:.:|.|.|..|.:.|.:|..::|:.:|..|::|||..|.|.|::.||.|.||.:|||
Zfish   496 LPDSEESEIFEFHFCDFEFSELDLVKCGIKMYYELGVVDKFHIPRETLVRFVYSVSKGYRKITYH 560

  Fly   861 NWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYST 925
            ||||.|||.|.||.:|.|....:.:.::|.:|::...||||:|||||||.:|:|:.:|||:|:.:
Zfish   561 NWRHGFNVGQTMFTLLMTGDLKRYYTDLEAMAMVTAGLCHDIDHRGTNNLYQMKSGNPLAKLHGS 625

  Fly   926 STMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQP- 989
            |.:|.||.:....:|......|..||:...:..||.:::.||::||||:|||||..|.:.|.|. 
Zfish   626 SILERHHLEFGKTLLRDEALNIYQNLNRRQHETVIHLMDIAIIATDLALYFKKRTMFQKIVDQSK 690

  Fly   990 --------TSYWVAEEPR-ALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELN 1045
                    |.|.:.|..| .::.||.||.||||||.|||||:.:||..|::||:||||:|:..|.
Zfish   691 TYDSWDSWTKYMMLETTRKEIVMAMMMTACDLSAIAKPWEIQSKVALSVAAEFWEQGDLERTVLE 755

  Fly  1046 ITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDLADVVKTK 1110
            ..||.:|:|.|.:|||.:|..|||.:|..:|:.|:....::.|::|.:.:||..|..|.::.:.|
Zfish   756 QQPIPMMDRNKAEELPKLQCGFIDFVCSFVYKEFSRFHVEITPMLERLLNNRKEWNALKEIHEAK 820

  Fly  1111 TSQDQEPEEEQQQQNVISNGDCK 1133
            .::..|.::.:::.:  :|.|.|
Zfish   821 VAKLDEAKKAKEEAH--ANSDHK 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 51/163 (31%)
GAF 611..762 CDD:214500 37/179 (21%)
PDEase_I 859..1094 CDD:278654 104/244 (43%)
pde6aNP_001007161.1 GAF 74..233 CDD:214500 51/164 (31%)
GAF 255..442 CDD:214500 40/188 (21%)
PDEase_I 559..803 CDD:278654 104/243 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589303
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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