DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and dnc

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_726846.1 Gene:dnc / 31309 FlyBaseID:FBgn0000479 Length:1209 Species:Drosophila melanogaster


Alignment Length:1218 Identity:242/1218 - (19%)
Similarity:393/1218 - (32%) Gaps:410/1218 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QQQQQQQQQQQQQQHQQQQQQTPSHSPQIQHHSEIIPATTGLHLRSIEEPATTPLQ--FQPTGRM 87
            |||||||||.||...|.|....||       ...|:...|   |.|...|:|.|.|  .|..|: 
  Fly   242 QQQQQQQQQLQQPLLQSQPHFVPS-------SGNILSQVT---LYSGSNPSTNPCQSAVQNQGQ- 295

  Fly    88 NTEQGGTGYGGYGSSEHSLLIATRHAGVPLP------------------LAQHQPLP-------- 126
            |:............:::....:.:....|||                  |.:|||||        
  Fly   296 NSNPNPNQNPNTNPNQNQQRCSCQPQTSPLPHIKEEEESDQANFKHQTSLKEHQPLPPPITIATG 360

  Fly   127 --AHYQPLNHSGAAPPSSSNGSSSSGGG------VQTSATPQQQQQYQVQQPYQYQYQHHYHHQA 183
              ...:.::||.|.  |||.|:...||.      ..||:||..:.:.:.::|::           
  Fly   361 YCGSCESVHHSSAT--SSSAGTVPPGGQQTQEYIAGTSSTPSPRIKLKFRKPHK----------- 412

  Fly   184 NSPQHHRPYDPEHARMEAWLDENQEFVQDYFIRKATRQTVDAW---LVSHATSAGNDVVSST--- 242
                                                    ..|   :::...|||....::|   
  Fly   413 ----------------------------------------SCWSRIVLAPIGSAGGSSSATTVIG 437

  Fly   243 SPTHANGQTSSSRGGSGATTPVR---KISAHEFERGGLLKPIVNTIDGTPTFLSIGPPMDNGSVG 304
            |.::....:||:.||:..||...   .::||.           .....:.:.|:...|.::..: 
  Fly   438 SNSNETLASSSTTGGTATTTQNSSSVSVAAHH-----------RLTSSSASALATSHPSNSQLL- 490

  Fly   305 GSCSNLQNVGGVVAGQYQYNHQQHHHNHAHLHHSQHSHYQAGGAVGSSSLGSTGGASGAGGAPSL 369
             ..|.:|...|.: |..|..|.::..|..|...:.....:.|....|               |..
  Fly   491 -PTSKMQAEQGSI-GDLQKYHSRYLKNRRHTLANVRFDVENGQGARS---------------PLE 538

  Fly   370 GGSGGAGNGHQYPYYHCHQR---------------PQRLSRNELKQLDEKELIFELVKDICNELE 419
            |||..||...|    :..||               |:.:|||       ..:..|..|:      
  Fly   539 GGSPSAGLVLQ----NLPQRRESFLYRSDSDFEMSPKSMSRN-------SSIASERFKE------ 586

  Fly   420 VRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKC---LVSKLFDVCPRSTVEEMEQQDEV 481
                     |..|||::...|...:|.........|:..   |:| |.:| |.|.......|   
  Fly   587 ---------QEASILVDRSHGEDLIVTPFAQILASLRSVRNNLLS-LTNV-PASNKSRRPNQ--- 637

  Fly   482 RVAWGTGIAGHVAESGEPVNIPDAYQDERFN------------C--EIDSLTGYRTKALLCMPIK 532
                    :...:.||.|...|.:..:|.:.            |  :::::..:|:       :.
  Fly   638 --------SSSASRSGNPPGAPLSQGEEAYTRLATDTIEELDWCLDQLETIQTHRS-------VS 687

  Fly   533 DSSGDVIGVAQVINKMNGECFSEIDE--KVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLA 595
            |.:.  :...:::||.... |||...  ...|.|:  |...|...|.::...|.::.|..|: .|
  Fly   688 DMAS--LKFKRMLNKELSH-FSESSRSGNQISEYI--CSTFLDKQQEFDLPSLRVEDNPELV-AA 746

  Fly   596 RMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSFSRVFDFEANDLSEEEATSRTSP 660
            .....:||.                               |.::|........:|:.....|...
  Fly   747 NAAAGQQSA-------------------------------GQYARSRSPRGPPMSQISGVKRPLS 780

  Fly   661 YESRFPINIGITGHVATTGET-----VNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQI 720
            :.:.|            |||.     |..|.                           :|.||.:
  Fly   781 HTNSF------------TGERLPTFGVETPR---------------------------ENELGTL 806

  Fly   721 IGVIQL--INKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASA 783
            :|.:..  |..|:..:|:.|......|:.||                    ||..|         
  Fly   807 LGELDTWGIQIFSIGEFSVNRPLTCVAYTIF--------------------QSREL--------- 842

  Fly   784 TMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLL 848
                   |..|.:|....                            |:|:......|        
  Fly   843 -------LTSLMIPPKTF----------------------------LNFMSTLEDHY-------- 864

  Fly   849 SVKKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQI 913
             ||.|    .:||..||.:|.|....:|.|.....:|..:|....:.....||:||.|..|.|.:
  Fly   865 -VKDN----PFHNSLHAADVTQSTNVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLV 924

  Fly   914 KASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFK 977
            .:||.||.:|: .|.:|:||......:|.:.|..|..|:.......:.:::.|.:||||::.:..
  Fly   925 NSSSELALMYNDESVLENHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMS 989

  Fly   978 KRGPFLESVSQPTSYWVAEEPRALLRAMSMTV---------CDLSAITKPWEIEKRVADLVSSEF 1033
            ........|....   ||.....||...:..:         .|||..|||..:.||...|:..||
  Fly   990 LLADLKTMVETKK---VAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEF 1051

  Fly  1034 FEQGDMEKQE-LNITPI-DIMNREKEDELPMMQVNFIDSICLPIYEAFATL-SDKLEPLVEGVRD 1095
            |.|||.|::. ::|:|: |..|...|..    ||.|||.|..|::|.:|.| ....:.:::.:.:
  Fly  1052 FLQGDKERESGMDISPMCDRHNATIEKS----QVGFIDYIVHPLWETWADLVHPDAQDILDTLEE 1112

  Fly  1096 NRGHWIDLADVVKTKTSQDQEPE----------EEQQQQNV--ISNGD 1131
            ||.::..:.......:..|:.|:          ||..|:|:  :..||
  Fly  1113 NRDYYQSMIPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGD 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 32/180 (18%)
GAF 611..762 CDD:214500 21/157 (13%)
PDEase_I 859..1094 CDD:278654 71/247 (29%)
dncNP_726846.1 PDEase_I 870..1111 CDD:278654 71/247 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459132
Domainoid 1 1.000 82 1.000 Domainoid score I1950
eggNOG 1 0.900 - - E1_KOG3689
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46491
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.850

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