DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and Pde4c

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001263694.1 Gene:Pde4c / 290646 RGDID:727918 Length:671 Species:Rattus norvegicus


Alignment Length:318 Identity:93/318 - (29%)
Similarity:157/318 - (49%) Gaps:31/318 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   831 DFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALI 894
            |.::.|.|..:.|.|:||:::.:|. ||.|||..||.:|.|....:|.|.....:|.::|.||.|
  Rat   359 DLLKTFQIPADTLLRYLLTLEGHYHSNVAYHNSIHAADVVQSAHVLLGTPALEAVFTDLEVLAAI 423

  Fly   895 IGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCR 958
            ..|..||:||.|.:|.|.|..:|.||.:|: :|.:|:||......:|......|..|||:.....
  Rat   424 FACAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQGENCDIFQNLSTKQKLS 488

  Fly   959 VIRVLEDAILSTDLAVYFKKRGPF--LESVSQPTSYWV------AEEPRALLRAMSMTVC-DLSA 1014
            :.|::.|.:|:||::.:.......  :....:.||..|      ::..:.|   .|:..| |||.
  Rat   489 LRRMVIDMVLATDMSKHMSLLADLKTMVETKKVTSLGVLLLDNYSDRIQVL---QSLVHCADLSN 550

  Fly  1015 ITKPWEIEKRVADLVSSEFFEQGDMEKQE-LNITPIDIMNREKEDELPMMQVNFIDSICLPIYEA 1078
            ..||..:.::..:.:.:|||:|||.|::. |:|:|   |..:....:...||.|||.|..|::|.
  Rat   551 PAKPLPLYRQWTERIMAEFFQQGDRERESGLDISP---MCDKHTASVEKSQVGFIDYIAHPLWET 612

  Fly  1079 FATL-SDKLEPLVEGVRDNRGHWIDL-----------ADVVKTKTSQDQEPEEEQQQQ 1124
            :|.| ....:.|::.:.||| .|...           .|..|.:.:.::..|||::.:
  Rat   613 WADLVHPDAQELLDTLEDNR-EWYQSRVPCSPPHAIGPDRFKFELTLEETEEEEEEDE 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500
PDEase_I 859..1094 CDD:278654 74/246 (30%)
Pde4cNP_001263694.1 PDEase_I 388..629 CDD:278654 74/246 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347755
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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