DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and Pde4d

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001106799.1 Gene:Pde4d / 24627 RGDID:3281 Length:803 Species:Rattus norvegicus


Alignment Length:985 Identity:202/985 - (20%)
Similarity:356/985 - (36%) Gaps:272/985 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   297 PMDNGSVGGSCSNLQNVGGVV--AGQYQYNHQQHH------------HNHAHLHHSQHSHYQAGG 347
            |...||..||.|:    ||..  |.::.:.|:|||            |.|.||........|   
  Rat     9 PARAGSDEGSDSS----GGAALKAPKHLWRHEQHHQYPLRQPQFRLLHPHHHLPPPPPPSPQ--- 66

  Fly   348 AVGSSSL---------------GSTGGASGAGGAPSLGGSGGAGNGHQYPYYHCHQRPQRLSRNE 397
                ..|               |:|.|...:.||..:...|.:....   |.:|..         
  Rat    67 ----PQLQPPPPPPLPPPPPPPGATRGRYASSGASRVRHRGYSDTER---YLYCRA--------- 115

  Fly   398 LKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKCLVS- 461
                                                   .||.|..:..|.   ..||||..:| 
  Rat   116 ---------------------------------------MDRTSYAVETGH---RPGLKKSRMSW 138

  Fly   462 -------KLFDV-----CPRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCE 514
                   :.|||     ..||.::.|...       |:|:   :.::    |...:.:.|.|...
  Rat   139 PSSFQGLRRFDVDNGTSAGRSPLDPMTSP-------GSGL---ILQA----NFVHSQRRESFLYR 189

  Fly   515 IDSLTGYRTKALLCMPIKDSS------GD---VIGVAQVINKM-----NGECFSEIDEKVFSSYL 565
            .||......|::    .::||      ||   |...|||:..:     |....:.:.::..|...
  Rat   190 SDSDYDLSPKSM----SRNSSIASDIHGDDLIVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRS 250

  Fly   566 QFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQIL-L 629
            ..|            :|..|.:..:..:..:.:..|  |:|.:.:       .|.|.:.:|.. .
  Rat   251 PMC------------NQPSINKATITEEAYQKLASE--TLEELDW-------CLDQLETLQTRHS 294

  Fly   630 VHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFD 694
            |.|.....|.|:.:.|...|||   .||:....|.:     |:.........|.:|:..:.:   
  Rat   295 VSEMASNKFKRMLNRELTHLSE---MSRSGNQVSEY-----ISNTFLDKQHEVEIPSPTQKE--- 348

  Fly   695 ASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHM 759
                     |.:.      |..:.||.||.:|                           :|::.:
  Rat   349 ---------KEKK------KRPMSQISGVKKL---------------------------MHSSSL 371

  Fly   760 YEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACL 824
            ....|.....::...:||    :..:::.::           :.||.|:..::  ..:..|...:
  Rat   372 TNSCIPRFGVKTEQEDVL----AKELEDVNK-----------WGLHVFRIAEL--SGNRPLTVIM 419

  Fly   825 R-MFLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGE 887
            . :|.:.|.::.|.|..:.|..:|::::.:|. :|.|||..||.:|.|....:|:|.....:|.:
  Rat   420 HTIFQERDLLKTFKIPVDTLITYLMTLEDHYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTD 484

  Fly   888 IECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANL 951
            :|.||.|.....||:||.|.:|.|.|..:|.||.:|: :|.:|:||......:|......|..||
  Rat   485 LEILAAIFASAIHDVDHPGVSNQFLINTNSELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNL 549

  Fly   952 SSDDYCRVIRVLEDAILSTDLAVYFKKRGPF--LESVSQPTSYWV------AEEPRALLRAMSMT 1008
            :......:.::..|.:|:||::.:.......  :....:.||..|      ::..:.|   .:|.
  Rat   550 TKKQRQSLRKMAIDIVLATDMSKHMNLLADLKTMVETKKVTSSGVLLLDNYSDRIQVL---QNMV 611

  Fly  1009 VC-DLSAITKPWEIEKRVADLVSSEFFEQGDMEKQE-LNITPI-DIMNREKEDELPMMQVNFIDS 1070
            .| |||..|||.::.::..|.:..|||.|||.|::. :.|:|: |..|...|..    ||.|||.
  Rat   612 HCADLSNPTKPLQLYRQWTDRIMEEFFRQGDRERERGMEISPMCDKHNASVEKS----QVGFIDY 672

  Fly  1071 ICLPIYEAFATL-SDKLEPLVEGVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNGDCKA 1134
            |..|::|.:|.| ....:.:::.:.||| .|      .::...|...|..:.|:..        .
  Rat   673 IVHPLWETWADLVHPDAQDILDTLEDNR-EW------YQSTIPQSPSPAPDDQEDG--------R 722

  Fly  1135 MSDDDVAASEAEVAVDSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQ-PSDDDNDVDADADD 1198
            ....:....|..:..|..|:....:||.|..::|.::.|........||: |.|:..:.:|.|  
  Rat   723 QGQTEKFQFELTLEEDGESDTEKDSGSQVEEDTSCSDSKTLCTQDSESTEIPLDEQVEEEAVA-- 785

  Fly  1199 VDEQAAEENG 1208
             :|::..:.|
  Rat   786 -EEESQPQTG 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500 34/188 (18%)
GAF 611..762 CDD:214500 25/151 (17%)
PDEase_I 859..1093 CDD:459723 73/246 (30%)
Pde4dNP_001106799.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..103 24/104 (23%)
PDE4_UCR 218..334 CDD:465648 27/144 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..358 4/37 (11%)
PDEase_I 456..696 CDD:459723 73/246 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 705..724 3/26 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 732..803 16/66 (24%)

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