DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and Pde10a

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_017172949.1 Gene:Pde10a / 23984 MGIID:1345143 Length:891 Species:Mus musculus


Alignment Length:733 Identity:248/733 - (33%)
Similarity:391/733 - (53%) Gaps:62/733 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 PQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVS----ILLNADRGSLFLVQGRCN 450
            |:.:||  .:..:.:.:::||...|...|:.....|.:|..:|    |...||..:|:.: |.||
Mouse   165 PKEVSR--YQDTNMQGVVYELNSYIEQRLDTGGDNHLLLYELSSIIRIATKADGFALYFL-GECN 226

  Fly   451 G------PDGLKKCLVSKLFDVCPRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDE 509
            .      |.|:|:. ..:|....|              :..||.|:.:||:|.:.:.:.|...||
Mouse   227 NSLCVFIPPGMKEG-QPRLIPAGP--------------ITQGTTISAYVAKSRKTLLVEDILGDE 276

  Fly   510 RFNCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRN 574
            ||.......:|.|.:::||:||..:.||:||:.::......|.|....::|.::.|.:..:.:..
Mouse   277 RFPRGTGLESGTRIQSVLCLPIVTAIGDLIGILELYRHWGKEAFCLSHQEVATANLAWASVAIHQ 341

  Fly   575 AQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGSFS 639
            .|:......:.:.|..|||:::..|:....|:.::..|:.:.::|:...|..:..|...:|..:|
Mouse   342 VQVCRGLAKQTELNDFLLDVSKTYFDNIVAIDSLLEHIMIYAKNLVNADRCALFQVDHKNKELYS 406

  Fly   640 RVFDFEANDLSEEE----ATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDEN 700
            .:|     |:.||:    ...:|.  |.||.|..||.|.||.|||.:|:|:||.|.||:..||..
Mouse   407 DLF-----DIGEEKEGKPIFKKTK--EIRFSIEKGIAGQVARTGEVLNIPDAYADPRFNREVDLY 464

  Fly   701 SCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIV 765
            :.:..|:||||.|. |.|.:|||:|::||.:...|:|.|||..:.||:||.:.:|..:||.:...
Mouse   465 TGYTTRNILCMPIV-SRGSVIGVVQMVNKISGSAFSKTDENNFKMFAVFCALALHCANMYHRIRH 528

  Fly   766 AMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDL 830
            :.....||:|.||||:..|.:|...|.|..:|:.:...:..|.||...||:         |:..:
Mouse   529 SECIYRVTMEKLSYHSICTSEEWQGLMRFNLPARICRDIELFHFDIGPFEN---------MWPGI 584

  Fly   831 DFVERFH-------IDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEI 888
             ||...|       .:.|.|||:::|||||||.|.||||:||..||..|:|||....  .:|.::
Mouse   585 -FVYMIHRSCGTSCFELEKLCRFIMSVKKNYRRVPYHNWKHAVTVAHCMYAILQNNN--GLFTDL 646

  Fly   889 ECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYSTSTMEHHHFDQCLMILNSPGNQILANLSS 953
            |...|:|.||||||||||.:||:..|...|||.||||||||.|||.|.:.||...|:.|.:.|||
Mouse   647 ERKGLLIACLCHDLDHRGFSNSYLQKFDHPLAALYSTSTMEQHHFSQTVSILQLEGHNIFSTLSS 711

  Fly   954 DDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEP-RALLRAMSMTVCDLSAITK 1017
            .:|.:|:.::..||::||||:||..|.. ||.:.|..|..:..:. |..:..:.||.|||.::||
Mouse   712 SEYEQVLEIIRKAIIATDLALYFGNRKQ-LEEMYQTGSLNLHNQSHRDRVIGLMMTACDLCSVTK 775

  Fly  1018 PWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATL 1082
            .|.:.|..|:.:.:||:.:|| |.::|.|.||.:|:|:|.||:|..|:.|.:::.:|.|.....:
Mouse   776 LWPVTKLTANDIYAEFWAEGD-EMKKLGIQPIPMMDRDKRDEVPQGQLGFYNAVAIPCYTTLTQI 839

  Fly  1083 SDKLEPLVEGVRDNRGHW 1100
            ....|||::..|||...|
Mouse   840 LPPTEPLLKACRDNLNQW 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 41/171 (24%)
GAF 611..762 CDD:214500 58/154 (38%)
PDEase_I 859..1094 CDD:278654 99/235 (42%)
Pde10aXP_017172949.1 GAF 196..339 CDD:376570 40/158 (25%)
GAF 372..527 CDD:214500 59/162 (36%)
PDEase_I 619..851 CDD:365964 99/235 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4111
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D114875at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.770

Return to query results.
Submit another query.