DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and Pde4d

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_006517706.1 Gene:Pde4d / 238871 MGIID:99555 Length:803 Species:Mus musculus


Alignment Length:1041 Identity:211/1041 - (20%)
Similarity:366/1041 - (35%) Gaps:320/1041 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   259 GATTPVRKISAHEFERGGLLKPIVNTIDGTPTFLSIGPPMDNGSVGGSCSNLQNVGGVVAGQYQY 323
            |::.|.|.:|    |.|                        |.|.||:        .:.|.::.:
Mouse     5 GSSVPARAVS----EEG------------------------NDSAGGA--------ALKAPKHLW 33

  Fly   324 NHQQHH------------HNHAHLHHSQHSHYQAGGAVGSSSL---------------GSTGGAS 361
            .|:|||            |.|.||........|       ..|               |:|.|..
Mouse    34 RHEQHHQYPLRQPQFRLLHPHHHLPPPPPPSPQ-------PQLQPPPPPPLPPPPPPPGATRGRY 91

  Fly   362 GAGGAPSLGGSGGAGNGHQYPYYHCHQRPQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHK 426
            .:.||..:...|.:....   |.:|..                                      
Mouse    92 ASSGASRVRHRGYSDTER---YLYCRA-------------------------------------- 115

  Fly   427 ILQNVSILLNADRGSLFLVQGRCNGPDGLKKCLVS--------KLFDV-----CPRSTVEEMEQQ 478
                      .||.|..:..|.   ..||||..:|        :.|||     ..||.::.|...
Mouse   116 ----------MDRTSYAVETGH---RPGLKKSRMSWPSSFQGLRRFDVDNGTSAGRSPLDPMTSP 167

  Fly   479 DEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGYRTKALLCMPIKDSS------GD 537
                   |:|:   :.::    |...:.:.|.|....||......|::    .::||      ||
Mouse   168 -------GSGL---ILQA----NFVHSQRRESFLYRSDSDYDLSPKSM----SRNSSIASDIHGD 214

  Fly   538 ---VIGVAQVINKM-----NGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDL 594
               |...|||:..:     |....:.:.::..|.....|            :|..|.:..:..:.
Mouse   215 DLIVTPFAQVLASLRTVRNNFAALTNLQDRAPSKRSPMC------------NQPSINKATITEEA 267

  Fly   595 ARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQIL-LVHEADKGSFSRVFDFEANDLSEEEATSRT 658
            .:.:..|  |:|.:.:       .|.|.:.:|.. .|.|.....|.|:.:.|...|||   .||:
Mouse   268 YQKLASE--TLEELDW-------CLDQLETLQTRHSVSEMASNKFKRMLNRELTHLSE---MSRS 320

  Fly   659 SPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQIIGV 723
            ....|.:     |:.........|.:|:..:.:            |.:.      |..:.||.||
Mouse   321 GNQVSEY-----ISNTFLDKQHEVEIPSPTQKE------------KEKK------KRPMSQISGV 362

  Fly   724 IQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEA 788
            .:|                           :|::.:....|.....::...:||    :..:::.
Mouse   363 KKL---------------------------MHSSSLTNSCIPRFGVKTEQEDVL----AKELEDV 396

  Fly   789 HRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLR-MFLDLDFVERFHIDYEVLCRWLLSVKK 852
            ::           :.||.|:..::  ..:..|...:. :|.:.|.::.|.|..:.|..:|::::.
Mouse   397 NK-----------WGLHVFRIAEL--SGNRPLTVIMHTIFQERDLLKTFKIPVDTLITYLMTLED 448

  Fly   853 NYR-NVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKAS 916
            :|. :|.|||..||.:|.|....:|:|.....:|.::|.||.|.....||:||.|.:|.|.|..:
Mouse   449 HYHADVAYHNNIHAADVVQSTHVLLSTPALEAVFTDLEILAAIFASAIHDVDHPGVSNQFLINTN 513

  Fly   917 SPLAQLYS-TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRG 980
            |.||.:|: :|.:|:||......:|......|..||:......:.:::.|.:|:||::.:.....
Mouse   514 SELALMYNDSSVLENHHLAVGFKLLQEENCDIFQNLTKKQRQSLRKMVIDIVLATDMSKHMNLLA 578

  Fly   981 PF--LESVSQPTSYWV------AEEPRALLRAMSMTVC-DLSAITKPWEIEKRVADLVSSEFFEQ 1036
            ..  :....:.||..|      ::..:.|   .:|..| |||..|||.::.::..|.:..|||.|
Mouse   579 DLKTMVETKKVTSSGVLLLDNYSDRIQVL---QNMVHCADLSNPTKPLQLYRQWTDRIMEEFFRQ 640

  Fly  1037 GDMEKQE-LNITPI-DIMNREKEDELPMMQVNFIDSICLPIYEAFATL-SDKLEPLVEGVRDNRG 1098
            ||.|::. :.|:|: |..|...|..    ||.|||.|..|::|.:|.| ....:.:::.:.|||.
Mouse   641 GDRERERGMEISPMCDKHNASVEKS----QVGFIDYIVHPLWETWADLVHPDAQDILDTLEDNRE 701

  Fly  1099 HWIDLADVVKTKTSQDQEP----EEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEKASVN 1159
            .:........:....|||.    :.|:.|..:....||                 :|.:||.|  
Mouse   702 WYQSTIPQSPSPAPDDQEEGRQGQTEKFQFELTLEEDC-----------------ESDTEKDS-- 747

  Fly  1160 GSNVANNSSNTNKKIAVASHPTSTQ-PSDDDNDVDADADDVDEQAAEENGHDAEVDEASCRSNST 1223
            ||.|..::|.::.|........||: |             :|||..||...:.|....:|..:..
Mouse   748 GSQVEEDTSCSDSKTLCTQDSESTEIP-------------LDEQVEEEAVAEEESQPETCVPDDC 799

  Fly  1224 C 1224
            |
Mouse   800 C 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 34/188 (18%)
GAF 611..762 CDD:214500 25/151 (17%)
PDEase_I 859..1094 CDD:278654 73/247 (30%)
Pde4dXP_006517706.1 PDE4_UCR 218..334 CDD:375549 27/144 (19%)
PDEase_I 456..697 CDD:365964 73/247 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844403
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3689
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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