DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde-6

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_001370828.1 Gene:pde-6 / 190808 WormBaseID:WBGene00022389 Length:760 Species:Caenorhabditis elegans


Alignment Length:907 Identity:194/907 - (21%)
Similarity:343/907 - (37%) Gaps:252/907 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 DNGSVGGSCSNLQNVGGVVAGQYQYNHQQHHHNHAHLHHSQHSHYQAGGAVGSSS---------- 353
            |...|||. ...::|.|..|      |.|......|...::....:|..|..:::          
 Worm     3 DRSGVGGE-EGEKSVLGASA------HSQAGRRQQHTPAARRGAQRAPAATAAAASRPVFAMRWC 60

  Fly   354 LGSTGGASGAGGAPSLGGSGGAGNGHQYPYYHCHQRPQRLSRNELKQLDEKELIFELVKDICNEL 418
            .|.:...:|.||    |||.||             .|..|       |...........|....:
 Worm    61 CGGSYSENGGGG----GGSRGA-------------PPTPL-------LTVAATSSSTAHDTFGPM 101

  Fly   419 EVRTLCHKIL----QNVSILLNADRGSLFLVQGRCNGPDGLKKCLV-------SKLFDVCPRSTV 472
            :|:.|...::    ...|:||::.|.|.::             |.|       |.:..:||.:..
 Worm   102 QVKMLKTAVIVTEGTGESVLLDSLRASGWI-------------CTVSFPTQATSDVESICPLAVF 153

  Fly   473 EEMEQQDEVRVAWGTGIAGHVAE-SGEP---VNIPDAYQDERFNCEIDSLTGYRTKAL----LCM 529
            .::      ||...:.||..|:. |.|.   |:|.:.:..|:           |.:||    :..
 Worm   154 IDL------RVPHPSQIAKDVSSVSTEEVLIVSIAEKHISEK-----------RRRALAQSNIIH 201

  Fly   530 PIKDSSGDVI---GVAQVINKMNG--ECFSEIDEKVFSSYLQFCG---------------IGLRN 574
            .:..::.||:   .|.::.|::..  ..|:.:||.  ...::.|.               .|...
 Worm   202 HVTWNTRDVVLFDYVGRLANRIRALPALFAVLDET--DQAVEICDEQRVVQYVNRAYENVTGCIR 264

  Fly   575 AQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRI-LTHMQSLIQCQRVQILLVHEADKGSF 638
            :::..:.:.|::|..  |..||...|.:.:.:....|: ..:....:..:|       ....|..
 Worm   265 SEVIGQPESEMRRKS--LPRARGEEERRRSCDWKFIRVPFANNSQFVYMKR-------SNTTGDT 320

  Fly   639 SRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSCF 703
            :.:|    .|:|.:...|:|...|:  ||:     .|.|....|:           |.||...  
 Worm   321 AAIF----RDVSLKSLKSQTGGIEA--PIS-----EVLTMLRDVS-----------ARVDGEP-- 361

  Fly   704 KHRSILCMAIKNSLGQIIGVIQL----INKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAI 764
                  ...||::: :::...:|    ||:|.:.|...                   |..|:..|
 Worm   362 ------AQTIKDAM-KVLSSHELYAPSINRFRDADRIA-------------------TQYYDGLI 400

  Fly   765 -----VAMAKQSVTLEVLSYHASATMDEAHRLR------RLRVPSAVHFRLHD---FKFDDIHFE 815
                 ....|:||.             :|||.:      |.||.:.|...|.:   :|||.:|.|
 Worm   401 RLHHPARQRKRSVV-------------DAHREKRGSHGERRRVSADVKNALENDNCWKFDILHLE 452

  Fly   816 ---DDDTL-KACLRMFLDLDFVERFHI------DYEVLCRWLLSVKKNYR-NVTYHNWRHAFNVA 869
               |...| :..:::|      ||:.:      ..::|.||:||::.:|. ..||||..||.:|.
 Worm   453 KVSDHHALSQVGMKVF------ERWKVCDVLGCSDDLLHRWILSIEAHYHAGNTYHNATHAADVL 511

  Fly   870 QMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHF 933
            |.....|.:........|...:|.::....|||||.|..|::.|.....||.||: .|.:|:||.
 Worm   512 QATSFFLDSPSVAVHVNESHAVAALLAAAVHDLDHPGRGNAYLINTRQSLAILYNDNSILENHHI 576

  Fly   934 DQC--LMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAE 996
            ...  |.:.::....|.::||.:::.::...:.:.:|:||::.:|       |.:::.....|.:
 Worm   577 ALAFQLTLQHNANVNIFSSLSREEFIQMRHAMVEMVLATDISRHF-------EYLAKFNKMHVTD 634

  Fly   997 EPRALLRAMSMTVCDL----SAITKP---WEIEKRVADLVSSEFFEQGDMEKQE-LNITPIDIMN 1053
            .|.......|:|:||:    :.|:.|   |.:.:|.|..:..|:|||...||:: |.:| :::.:
 Worm   635 VPEEQRDTNSLTICDMLVKCADISNPAREWGLCQRWAHRIVEEYFEQTREEKEKGLPVT-MEVFD 698

  Fly  1054 REKEDELPMMQVNFIDSICLPIYEAFATLSD--KLEPLVEGVRDNRGHWIDLADVVKTKTSQ 1113
            | ....:|:.|..|||...   .|||||.::  ||..|.:.:..|...|       |..|||
 Worm   699 R-NTCNVPITQCGFIDMFA---REAFATFTEFAKLGELSDQLESNYEKW-------KVMTSQ 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 34/200 (17%)
GAF 611..762 CDD:214500 26/155 (17%)
PDEase_I 859..1094 CDD:278654 68/247 (28%)
pde-6NP_001370828.1 PDEase_I 501..737 CDD:395177 68/247 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.