DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde-4

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_871945.1 Gene:pde-4 / 174235 WormBaseID:WBGene00020114 Length:674 Species:Caenorhabditis elegans


Alignment Length:385 Identity:109/385 - (28%)
Similarity:179/385 - (46%) Gaps:51/385 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   772 VTLEVLSYHASATMDEAHRLRRLRVPS----------------AVHF-RLHD-----FKFDDIHF 814
            :||.:|....:|.|::...:|:||.||                |||. ||.|     ||.|::..
 Worm   298 MTLSILKKAQTAAMNKISGVRKLRAPSHDGHVPEYGVNCAREIAVHMQRLDDWGPDVFKIDELSK 362

  Fly   815 EDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILTTT 879
            ....|: ....:....:..:.|.|....|..:||:::.:|||..|||:.||.:|||.|..:|.:.
 Worm   363 NHSLTV-VTFSLLRQRNLFKTFEIHQSTLVTYLLNLEHHYRNNHYHNFIHAADVAQSMHVLLMSP 426

  Fly   880 QWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSP 943
            ...::|.::|.||.|.....||:||.|..|.:.|.:::.||.:|: .|.:|.||......:|...
 Worm   427 VLTEVFTDLEVLAAIFAGAVHDVDHPGFTNQYLINSNNELAIMYNDESVLEQHHLAVAFKLLQDS 491

  Fly   944 GNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVA----------EEP 998
            ....|||||.....:..:::.|.:|:||::.:..........|....   ||          .:.
 Worm   492 NCDFLANLSRKQRLQFRKIVIDMVLATDMSKHMSLLADLKTMVEAKK---VAGNNVIVLDKYNDK 553

  Fly   999 RALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQ-ELNITPI-DIMNREKEDELP 1061
            ..:|::| :.:.|||..|||.|:.::....:..|::.|||.||: .|.|:|: |..|...|..  
 Worm   554 IQVLQSM-IHLADLSNPTKPIELYQQWNQRIMEEYWRQGDKEKELGLEISPMCDRGNVTIEKS-- 615

  Fly  1062 MMQVNFIDSICLPIYEAFATL-SDKLEPLVEGVRDNRGHWI-----DLADVVKTKTSQDQ 1115
              ||.|||.|..|:||.:|.| ....:.:::.:.:|| .|.     :..|..:|.|..|:
 Worm   616 --QVGFIDYIVHPLYETWADLVYPDAQNILDQLEENR-EWYQSRIPEEPDTARTVTEDDE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500
PDEase_I 859..1093 CDD:459723 74/247 (30%)
pde-4NP_871945.1 PDE4_UCR 157..273 CDD:465648
PDEase_I 406..646 CDD:459723 74/247 (30%)
Blue background indicates that the domain is not in the aligned region.

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