DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde-1

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_493343.1 Gene:pde-1 / 173200 WormBaseID:WBGene00011433 Length:664 Species:Caenorhabditis elegans


Alignment Length:390 Identity:96/390 - (24%)
Similarity:164/390 - (42%) Gaps:90/390 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   805 HDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNY--RNVTYHNWRHAFN 867
            |..|:  :.||          :|....|::||.:....|..:|.:::..|  .|..|||..||.:
 Worm   288 HALKY--VGFE----------LFNRYGFMDRFKVPLTALENYLSALEVGYSKHNNPYHNVVHAAD 340

  Fly   868 VAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHH 931
            |.|....:|:.|......|::|.||::.|.|.||.:|.|..|:|.|::.|..|.||: .|.:|:|
 Worm   341 VTQSSHFMLSQTGLANSLGDLELLAVLFGALIHDYEHTGHTNNFHIQSQSQFAMLYNDRSVLENH 405

  Fly   932 HFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAE 996
            |...|..::......||.:|:.|:|..:..::.:.:|:||::.:|.:.......:|.|..   .:
 Worm   406 HVSSCFRLMKEDDKNILTHLTRDEYKELRNMVIEIVLATDMSTHFMQIKTMKSMLSLPEG---ID 467

  Fly   997 EPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDME-KQELNITPI-DIMNREKEDE 1059
            :.:||  .:.:..||:|...|||.:.:|..:.|..|||.|||:| ...|..:|: |.......|.
 Worm   468 KNKAL--CLIVHACDISHPAKPWNLHERWTEGVLEEFFRQGDLEASMGLPYSPLCDRHTVHVADS 530

  Fly  1060 LPMMQVNFIDSICLP-----------IYEAFATL-------------------SDKLEPL----- 1089
                |:.|||.|..|           :.|...:|                   |:.|.||     
 Worm   531 ----QIGFIDFIVEPTMVVCGELLVKMVEPLVSLPPTDSLFPPSVDGGDDKSPSNALSPLPDLRN 591

  Fly  1090 -------------------------VEGVRDNRGHWIDLA----DVVKTKTSQDQEPEEEQQQQN 1125
                                     ::.:.:|:.||.:.|    :..|.|.:.:.|...:|.::|
 Worm   592 SSTSPSSIRRIPLNYAGKLDIPTPWMKFLHENKAHWKERAAKEEEERKIKEAAEAEAAAKQVEEN 656

  Fly  1126  1125
             Worm   657  656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500
PDEase_I 859..1094 CDD:278654 75/297 (25%)
pde-1NP_493343.1 PDEase_I_N 195..248 CDD:285672
PDEase_I 332..558 CDD:278654 70/234 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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