DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and Pde7b

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_008756813.1 Gene:Pde7b / 140929 RGDID:621016 Length:498 Species:Rattus norvegicus


Alignment Length:466 Identity:111/466 - (23%)
Similarity:200/466 - (42%) Gaps:91/466 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   717 LGQIIGVIQLINKF-NELDFTKND---ENFVEAFAIFCG-------MGI---------------- 754
            |.::|.:::|:.|. :||..||..   || .:||..|.|       .|:                
  Rat    43 LPEMIRMVKLVWKSKSELQATKPRGILEN-EDAFHGFPGDVRLRGQTGVPAERRGSYPFIDFRLL 106

  Fly   755 -HNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDF----------- 807
             :.||..|     :..:.....:||:...  ..|:..||.:...:.:|....|:           
  Rat   107 NNTTHSGE-----IGSKKKVRRLLSFQRH--FHESRLLRGMTPQAPLHLLDEDYLGQARHMLSKV 164

  Fly   808 ---KFDDIHFE---DDDTLKACL-RMFLDLDFVERFHIDYEVLCRWLLSVKKNYR-NVTYHNWRH 864
               .||...|:   :.::|...| .:|.....:..|.:|...|.|:|:.|:::|. :..|||..|
  Rat   165 GMWDFDIFLFDRLTNGNSLVTLLCHLFNSHGLIHHFKLDMVTLHRFLVMVQEDYHGHNPYHNAVH 229

  Fly   865 AFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLY-STSTM 928
            |.:|.|.|...|...:.......::.:..::....||:||.|.|..|.||.:..||.|| :.|.:
  Rat   230 AADVTQAMHCYLKEPKLASFLTPLDIMLGLLAAAAHDVDHPGVNQPFLIKTNHHLANLYQNMSVL 294

  Fly   929 EHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTD----------LAVYFKKRGPFL 983
            |:||:...:.:|..  :::||:|..:....:.:.|...||:||          |..:...:...|
  Rat   295 ENHHWRSTIGMLRE--SRLLAHLPKEMTQDIEQQLGSLILATDINRQNEFLTRLKAHLHNKDLRL 357

  Fly   984 ESVSQPTSYWVAEEPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDME-KQELNIT 1047
            |::          :.|..:..:::...|:....:.||:.|:.::.|..||:.|||:| |.||.|:
  Rat   358 ENI----------QDRHFMLQIALKCADICNPCRIWEMSKQWSERVCEEFYRQGDLEQKFELEIS 412

  Fly  1048 PIDIMNREKEDELPMMQVNFIDSICLPIYEAFA------TLSDKLEPLVEGVRDNRGHWIDLADV 1106
            |  :.|::| |.:|.:|:.|:..|..|::..:|      |||   |.::..:..|:..|..|...
  Rat   413 P--LCNQQK-DSIPSIQIGFMTYIVEPLFREWARFTGNSTLS---ESMLNHLAHNKAQWKSLLSN 471

  Fly  1107 VKTKTSQDQEP 1117
            ...:....|:|
  Rat   472 QHRRRGSGQDP 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 17/72 (24%)
PDEase_I 859..1094 CDD:278654 68/252 (27%)
Pde7bXP_008756813.1 PDEase_I 224..458 CDD:278654 68/251 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347774
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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