DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and Pde11a

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:NP_543169.1 Gene:Pde11a / 140928 RGDID:621793 Length:935 Species:Rattus norvegicus


Alignment Length:947 Identity:406/947 - (42%)
Similarity:565/947 - (59%) Gaps:83/947 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 EHARMEAWLDENQEFVQDYFIRKATRQTVDAWLVSHATSAG-NDV------VSSTSPTHANGQTS 252
            :...:|.:||.:.|..:||.:||..::.||.||..|::..| :|:      .||.:.:.|.|.|.
  Rat     7 DFGEVETFLDRHPELFEDYLMRKGKQELVDKWLQRHSSGQGASDLRPALAGASSLAQSSARGSTG 71

  Fly   253 SSRGGSGATTPVRKISAHEFERGGLLKPIVNTIDGTPTFLSIGPPMDNGSVGGSCSNLQNVGGVV 317
            .. ||:|   |....::|....||       ...|.|    :.|...:||.|.  .|||.    .
  Rat    72 IG-GGAG---PQGSANSHPASGGG-------ESAGVP----LSPSWASGSRGD--GNLQR----R 115

  Fly   318 AGQYQYNHQQHHHNHAHLHHSQHSHYQAGGAVGSSSLGSTGGASGAGGAPSLGGSGGAGNGH--- 379
            |.|.:...........|::.:......:......||:........|...|..       ..|   
  Rat   116 ASQKELRKSFARSKAIHVNRTYDEQVTSRAQEPLSSVRRRALLRKASSLPPT-------TAHILS 173

  Fly   380 ----------QYP----YYHCHQRPQRLSRNELKQLDEKELIFELVKDICNELEVRTLCHKILQN 430
                      |||    .|.||          ||:.:|::...||||||.|:|::.:|.:|||..
  Rat   174 ALLESRVNLPQYPPTAIDYKCH----------LKKHNERQFFLELVKDISNDLDLTSLSYKILIF 228

  Fly   431 VSILLNADRGSLFLVQGRCNGPDGLKKCLVSKLFDV------CPRSTVEEMEQQDEVRVAWGTGI 489
            |.::::|||.|||||:|...|    ||.||||.|||      .|.||.   |..:||:|.||.||
  Rat   229 VCLMVDADRCSLFLVEGAAAG----KKTLVSKFFDVHAGTPLLPCSTT---ENSNEVQVPWGKGI 286

  Fly   490 AGHVAESGEPVNIPDAYQDERFNCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKM-NGECF 553
            .|:|.|.||.|||||||||.|||.|||.||||:||:||||||::|.|::|||||.|||: .|..|
  Rat   287 IGYVGEHGETVNIPDAYQDRRFNDEIDKLTGYKTKSLLCMPIRNSDGEIIGVAQAINKVPEGAPF 351

  Fly   554 SEIDEKVFSSYLQFCGIGLRNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQS 618
            :|.||||...||.||||.:.||||:..|:.|.:|::.||::...:||||:.:|.:|.:|:...|:
  Rat   352 TEDDEKVMQMYLPFCGIAISNAQLFAASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQT 416

  Fly   619 LIQCQRVQILLVHEADKG--SFSRVFDFEANDLSEEEATSRTSPYE----SRFPINIGITGHVAT 677
            |::|:|..:||:.:.:..  .|::.|:..:...|.:...|.....|    |.:.||..|...||:
  Rat   417 LLKCERCSVLLLEDIESPVVKFTKSFELMSPKCSADAENSFKESVEKSSYSDWLINNSIAELVAS 481

  Fly   678 TGETVNVPNAYEDDRFDASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENF 742
            ||..|||.:||:|.||||..|:.|.|..||:||:.|.||..|||||.|::|:.:...|...|:..
  Rat   482 TGLPVNVSDAYQDPRFDAEADQISGFHIRSVLCVPIWNSNHQIIGVAQVLNRLDGKPFDDADQRL 546

  Fly   743 VEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDF 807
            .|||.||||:||:||.||::...:.|||||.|:||||||:.:..|..:.:...:|......:.|.
  Rat   547 FEAFVIFCGLGINNTIMYDQVKKSWAKQSVALDVLSYHATCSKAEVDKFKAANIPLVSELAIDDI 611

  Fly   808 KFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMM 872
            .|||...:.|..:.|.||||::|..|::|.||||.||||||:|:||||.|.||||||||||.|:|
  Rat   612 HFDDFSLDVDAMITAALRMFMELGMVQKFKIDYETLCRWLLTVRKNYRMVLYHNWRHAFNVCQLM 676

  Fly   873 FAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYSTS-TMEHHHFDQC 936
            ||:|||..:.:|..|:|.||:|:||||||||||||||:||.|:.|.|||||.|| |:|||||:..
  Rat   677 FAMLTTAGFQEILTEVEILAVIVGCLCHDLDHRGTNNAFQAKSDSALAQLYGTSATLEHHHFNHA 741

  Fly   937 LMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEPRAL 1001
            :|||.|.|:.|.|||||.:|..::::|:.:||:|||.:||::|..|.|.||:....|.....|.:
  Rat   742 VMILQSEGHNIFANLSSKEYSDLMQLLKQSILATDLTLYFERRTEFFELVSKGAYDWSITSHRDV 806

  Fly  1002 LRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVN 1066
            .|:|.||.|||.|:||||||.::||:||:||||||||.|:.||.:||..|.:|.::||||.:|:.
  Rat   807 FRSMLMTACDLGAVTKPWEISRQVAELVTSEFFEQGDRERSELKLTPSAIFDRNRKDELPRLQLE 871

  Fly  1067 FIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDL 1103
            :|||||:|:|:|...::.||:|:::.|..||..|.:|
  Rat   872 WIDSICMPLYQALVKVNAKLKPMLDSVAANRRKWEEL 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500 94/168 (56%)
GAF 611..762 CDD:214500 62/156 (40%)
PDEase_I 859..1093 CDD:459723 130/234 (56%)
Pde11aNP_543169.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..125 26/104 (25%)
GAF 217..380 CDD:214500 94/169 (56%)
GAF 402..568 CDD:214500 64/165 (39%)
PDEase_I 663..898 CDD:459723 130/234 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 915..935
Blue background indicates that the domain is not in the aligned region.

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