DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde1cb

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_017207862.1 Gene:pde1cb / 100536162 ZFINID:ZDB-GENE-090902-2 Length:698 Species:Danio rerio


Alignment Length:631 Identity:142/631 - (22%)
Similarity:241/631 - (38%) Gaps:106/631 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 LVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRF 693
            ||.:.::|..|.| |.:.|  .|..||...|.|             :..|...|:..:...|.:.
Zfish   142 LVKQLERGEASLV-DLKKN--LEYAATVLESVY-------------IEETRRLVDTEDELSDIQS 190

  Fly   694 DASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTH 758
            |:...|     .|..|.......:|      .::.:..|....::..:.|:|       ||....
Zfish   191 DSVPSE-----VRDWLASTFTRQMG------LMLRRTEEKPRFRSIVHAVQA-------GIFVER 237

  Fly   759 MYEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKAC 823
            ||        :::..:..|||..:..              ||...:..:.||.....:.....|.
Zfish   238 MY--------RRTSNMVGLSYPPNVI--------------AVLKNVDRWSFDVFALNESSGDHAL 280

  Fly   824 LRMFLDL----DFVERFHIDYEVLCRWLLSVK---KNYRNVTYHNWRHAFNVAQMMFAILTTTQW 881
            ..:|.:|    |.:.||.|....|..::.:::   ..|:| .|||..||.:|.|.:..:|..|..
Zfish   281 KFIFYELLTRYDLISRFKIPVSALVSFVEALEVGYSKYKN-PYHNLIHAADVTQTVHYLLLKTGM 344

  Fly   882 WKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGN 945
            .....|:|..|:|.....||.:|.||.|:|.|:..|..|.||: .|.:|.||......:|.....
Zfish   345 VHWMTELEIFAMIFAAAIHDYEHTGTTNNFHIQTRSDAAILYNDRSVLESHHVSASYRLLQDDDE 409

  Fly   946 -QILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEPRALLRAMSMTV 1009
             .||.|||.||:.....::.:.:|:||::.:|::.......:.||..   .::|:|:  ::.:..
Zfish   410 MNILYNLSKDDWREFRALVVEMVLATDMSCHFQQVKAMKNYLQQPEG---IDKPKAI--SLLLHA 469

  Fly  1010 CDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLP 1074
            .|:|...|.|::..|....:..|||.|||.| .||.: |...:...|...:...|:.|||.|.:|
Zfish   470 ADISHPAKTWDLHHRWTTSLLEEFFLQGDKE-AELGL-PFSPLCDRKSTMVAQSQIGFIDFIVVP 532

  Fly  1075 IYEAFATLSDKL-EPLVE--------GVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVISNG 1130
            .:.....:::|: .||:|        |.|...|     .||.::..:............::::..
Zfish   533 TFTVLTDMTEKIVTPLIEEATSSGLSGFRSITG-----GDVKRSSVNSSASDSSSSHNGSLLTVD 592

  Fly  1131 --DCKAMSDDDV----------AASEAEVAVDSPSEKASVNGSNVANNSSNTNKKIAVASHPTST 1183
              :.||:.:::|          ||.|.|       |||...........:...||....|.|...
Zfish   593 LKNFKALWNEEVSLNRERWKMQAAKETE-------EKAKRELEEQQEVENQVQKKELELSEPKKD 650

  Fly  1184 QPSDDDNDVDADADDVDEQAAEENGHDAEVDEASCRSNSTCSSSTA 1229
            .|.....:...:.....:....:||..:|..|:....:....|.||
Zfish   651 DPEPGVVNGPPEESPHGKSKKLQNGEVSEEAESPADEDKRTLSETA 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 27/132 (20%)
PDEase_I 859..1094 CDD:278654 72/245 (29%)
pde1cbXP_017207862.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589308
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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