DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde1c

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_031759760.1 Gene:pde1c / 100495383 XenbaseID:XB-GENE-994226 Length:762 Species:Xenopus tropicalis


Alignment Length:696 Identity:154/696 - (22%)
Similarity:269/696 - (38%) Gaps:134/696 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   629 LVHEADKGSFSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRF 693
            ||.:.::|..| |.|.:.|  .|..||...|.|             :..|...::..:...|.:.
 Frog   105 LVKQLERGEAS-VVDLKKN--LEYAATVLESVY-------------IDETRRLLDTEDELSDIQS 153

  Fly   694 DASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTH 758
            |:...|     .|..|.......:|.::...:...:|..:........|||.      |....::
 Frog   154 DSVPSE-----VRDWLASTFTRQMGMMLKRTEEKPRFRSIVHAVQAGIFVER------MYRRTSN 207

  Fly   759 M----YEKAIVAMAKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDT 819
            |    |..|::|:.|   .::..|:...|..|.:..              |..||  |.:|    
 Frog   208 MVGLSYPPAVIAVLK---NVDKWSFDVFALNDASGD--------------HGLKF--IFYE---- 249

  Fly   820 LKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNY---RNVTYHNWRHAFNVAQMMFAILTTTQW 881
                  :....|.:.||.|....|..::.:::..|   :| .|||..||.:|.|.:...|..:..
 Frog   250 ------LLTRYDLINRFKIPISALVSFVEALEVGYTKHKN-PYHNLIHAADVTQTVHYFLFKSGL 307

  Fly   882 WKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS-TSTMEHHHFDQCLMILNSPGN 945
            .....|:|..|:|.....||.:|.||.|:|.|:..|..|.||: .|.:|:||......:|.....
 Frog   308 VHWLTELEIFAMIFAAAVHDYEHTGTTNNFHIQTRSDSAILYNDRSVLENHHVSAAYRLLQDDEE 372

  Fly   946 -QILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEPRALLRAMSMTV 1009
             .||.|||.||:.....::.:.:|:||::.:|.:......::.||..   .::|:||  ::.:..
 Frog   373 MNILYNLSKDDWREFRALVIEMVLATDMSCHFHQIKQMKNALQQPEG---IDKPKAL--SLLLHT 432

  Fly  1010 CDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLP 1074
            .|:|...|.|::..|....:..|||.|||.| .||.: |...:.......:...|:.|||.|..|
 Frog   433 ADISHPAKNWDLHHRWTMSLLEEFFRQGDKE-AELGL-PFSPLCDRNSTMVAQSQIGFIDFIVEP 495

  Fly  1075 IYEAFATLSDKLE----PLVE--------GVRDNRGHWIDLADVVKTKTSQDQEPEEEQQQQNVI 1127
               .|..|:|.:|    ||:|        |.|.:..:.|..:||               ::.:|.
 Frog   496 ---TFTVLTDMIEKIVVPLIEEASRSGLTGFRRSSLNSITTSDV---------------KRSSVK 542

  Fly  1128 SNGDCKAMSDDDVAASEAEVAVDSPSEKASVNGSNVANNSSNTNKKIAVASHPTSTQPSDDDNDV 1192
            |.|     |:...:.:.:.:.||..|.|.:.....:.|......:.:           .|.|...
 Frog   543 STG-----SEGSASLNCSILTVDFKSFKCTWYDVVLQNREKWKTQAV-----------KDADEKA 591

  Fly  1193 DADADDVDEQAAEEN---GHDAEVDEASCRSNSTCSSSTASSCLSTPPPTGEDDSTPVSPLKTLQ 1254
            ..:|::.|::..:||   ..|.:.||...:::        ...|:...|..|..|......::.|
 Frog   592 KREAEEKDKRDPDENHQEKEDKKTDENEDKND--------KPLLNKHEPNKEHHSGDSKLTESSQ 648

  Fly  1255 AKLVAANL-NALQRQTSNQAQTQKQRCKSCDHS---RSGLQVRKTS 1296
            ..:....| ||..::.|:..||.:::....|..   ::|::...:|
 Frog   649 GNINGTRLPNAKNQECSSGDQTNQEKLGDTDSKQVVQNGIKCNDSS 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500 26/136 (19%)
PDEase_I 859..1094 CDD:278654 74/248 (30%)
pde1cXP_031759760.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D904682at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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