DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde4a

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_031755243.1 Gene:pde4a / 100488846 XenbaseID:XB-GENE-5789473 Length:744 Species:Xenopus tropicalis


Alignment Length:166 Identity:35/166 - (21%)
Similarity:64/166 - (38%) Gaps:37/166 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 PRMMAIENEFNQCEER-YRHFTTDQQNGSSHAVSIAYNVEIGWQDDRNTTYACYGYLISTRGVVS 196
            |..|.::.:|  |:.. ..|||.|.          |..::|...|  .:|.....::::...::|
 Frog   156 PLAMGLQLDF--CDSNVIDHFTCDS----------APLLQISCTD--TSTLELMSFILALFTLIS 206

  Fly   197 S--ASCLSERADLPNIVRIGGID------SLDNSRVVPIEKVIIHPD----YNKETLEHNIAIVK 249
            :  ...||....:..|:||....      |..:|.|:.:.  |.:..    |.|.:.:..:|:.|
 Frog   207 TLILVILSYTYIIRTILRIPSAQQRKKAFSTCSSHVIVVS--ISYGSCIFMYVKTSAKEGVALTK 269

  Fly   250 ----LESTVDPSENVFPTCLWQNITHSPVKQLVMDL 281
                |.::|.|..|.|    ...:.:..|||...|:
 Frog   270 GVAILNTSVAPMLNPF----IYTLRNQQVKQAFKDV 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500
GAF 611..762 CDD:214500
PDEase_I 859..1093 CDD:459723
pde4aXP_031755243.1 PDE4_UCR 166..281 CDD:465648 25/128 (20%)
PDEase_I 405..645 CDD:459723
Blue background indicates that the domain is not in the aligned region.

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