DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pde11 and pde6b

DIOPT Version :10

Sequence 1:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_012808736.2 Gene:pde6b / 100487945 XenbaseID:XB-GENE-961019 Length:859 Species:Xenopus tropicalis


Alignment Length:839 Identity:263/839 - (31%)
Similarity:436/839 - (51%) Gaps:105/839 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   397 ELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLFLVQGRCNGPDGLKKCLVS 461
            ||.|::|.|::||||.|:...:.:..:..|.|:.:|.|::|||.|||:.:.|...|:     |.:
 Frog    55 ELVQVEESEILFELVNDMQESINMEKVVFKTLRRISFLIHADRCSLFMYRQRNGTPE-----LAT 114

  Fly   462 KLFDVCPRSTVEE--MEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDERFNCEIDSLTGYRTK 524
            :||:|...|.:||  :....|:......||.||||.:.:.:|:.|..:...::...|.||.|.||
 Frog   115 RLFNVKSNSKLEECLVPPDSEIVYPLDIGIVGHVAHTKKTINVKDVSECTVYSKFADELTDYETK 179

  Fly   525 ALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGLRNAQLYEKSQL---EIK 586
            .:|..||.:.. ||:.|...:||::|..|:..||:||..||.|..:   |.::|..|.|   |.:
 Frog   180 NILATPILNGK-DVVAVIMAVNKLDGPFFTNYDEEVFLKYLNFASL---NLKIYHLSYLHNCETR 240

  Fly   587 RNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQI-LLVHEADKGSFS----------- 639
            |.||||..|..:|||.:.||....:....:::.:.|.|..: ||....:|..|.           
 Frog   241 RGQVLLWSANKVFEELTDIERQFHKAFYTVRAYLNCDRYSVGLLDMTKEKEFFDVWPVLMGEVPP 305

  Fly   640 ---------------RVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYE 689
                           :|.|:..:  .:|:.....:|....:.:..|:..:||.:|...|:.||..
 Frog   306 YTGPRTPDGREIVFYKVIDYILH--GKEDIKVIPNPPADHWALVSGLPTYVAESGFICNIMNAGA 368

  Fly   690 DDRFDASVD--ENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGM 752
            |:.|....:  :.|.:..:::|.|.|.|...:|:||....|:.:...|.:.||..:|:...|.|.
 Frog   369 DEMFKFQKEPLDESGWVVKNVLSMPIVNKKEEIVGVATFYNRKDGKPFDEQDETLMESLTQFLGW 433

  Fly   753 GIHNTHMYEKAIVAMAKQSVTLEVLSYHASATMDE-----------------------AHRLRRL 794
            .:.||..::|......::.:..:::.||.....||                       |..|:::
 Frog   434 SVLNTDTHDKMNKLENRKDIAQDMVMYHVKCDKDEIQDILPTREKLGKEVTECEEDEIAKTLKQV 498

  Fly   795 RVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYEVLCRWLLSVKKNYRNVTY 859
             :|....|.:::|:|.|....:.|.:|..::|:.:|..|::|.:..|.|.|::.::||.||.|||
 Frog   499 -LPGPTKFEIYEFRFSDFDCTEIDLVKCGIQMYYELGVVKKFQVPPEALVRFMYAMKKGYRRVTY 562

  Fly   860 HNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRGTNNSFQIKASSPLAQLYS 924
            |||||.|||||.||.:|.|.:..:.:.::|.:|::....|||:|||||||.:|:|:..|||:|:.
 Frog   563 HNWRHGFNVAQTMFTLLMTGKLKRYYTDLEAMAMVTAGFCHDIDHRGTNNLYQMKSQHPLAKLHG 627

  Fly   925 TSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTDLAVYFKKRGPFLESVSQP 989
            :|.:|.||.:....:|......|..||:...:..||.:::.||::||||:|||||..|.:.|.|.
 Frog   628 SSILERHHLEFGKFLLADESMNIFQNLNRRQHEHVIHLMDIAIIATDLALYFKKRTMFQKIVDQS 692

  Fly   990 TSY-----W-----VAEEPRALLRAMSMTVCDLSAITKPWEIEKRVADLVSSEFFEQGDMEKQEL 1044
            .:|     |     :....:.::.||.||.|||||||||||::.:||.||::||:||||:|:..|
 Frog   693 KTYEDEQKWTEYLSLETTRKEIVMAMMMTACDLSAITKPWEVQSKVALLVAAEFWEQGDLERTVL 757

  Fly  1045 NITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVEGVRDNRGHWIDLADVVKT 1109
            ...||.:|:|.|..|||.:|..|||.:|..:|:.||...::::|:::|:.:||..|..|||..:.
 Frog   758 QQQPIPMMDRNKSAELPKLQCGFIDFVCTFVYKEFARFHEEIQPMLDGLLNNRKEWKALADEYEA 822

  Fly  1110 KTSQDQEPEEEQQQQNVISNGDCKAMSDDDVAASEAEVAVDSPSEKASVNGSNVANNSS 1168
            |.   :..|||::::                   |.|:|    :.||:..|:|.|.:|:
 Frog   823 KV---KTVEEEKKKR-------------------EEELA----ARKAAAAGANAAKSST 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_609885.2 GAF 420..582 CDD:214500 53/163 (33%)
GAF 611..762 CDD:214500 36/179 (20%)
PDEase_I 859..1093 CDD:459723 103/243 (42%)
pde6bXP_012808736.2 GAF 77..236 CDD:214500 55/167 (33%)
GAF 258..445 CDD:214500 39/188 (21%)
PDEase_I 562..806 CDD:459723 103/243 (42%)

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