DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pde11 and pde10a

DIOPT Version :9

Sequence 1:NP_001286044.1 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster
Sequence 2:XP_031757888.1 Gene:pde10a / 100485841 XenbaseID:XB-GENE-1013417 Length:799 Species:Xenopus tropicalis


Alignment Length:724 Identity:240/724 - (33%)
Similarity:391/724 - (54%) Gaps:43/724 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   390 PQRLSRNELKQLDEKELIFELVKDICNELEV----RTLCHKILQNVSILLNADRGSLFLVQGRCN 450
            |..:|| :.:..:.:.:::||...:...|:.    :.|.:::...:.....||..:|:.: |.||
 Frog    74 PTEVSR-QYQDTNMQGVVYELNSYMEQRLDAGGDNKLLLYELSDIIKTATKADGFALYFL-GECN 136

  Fly   451 G------PDGLKKCLVSKLFDVCPRSTVEEMEQQDEVRVAWGTGIAGHVAESGEPVNIPDAYQDE 509
            .      |.|.|.       ...|.::|..:|        :||.::.|||:|...|.:.|...||
 Frog   137 NTLCLFTPTGTKD-------GQTPLTSVGPVE--------YGTTVSAHVAKSRNTVLVEDILGDE 186

  Fly   510 RF--NCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIGL 572
            ||  ...:||  |.|.:::||:||..:.||:||:.::........|....::|.::.|.:..:.:
 Frog   187 RFPKGTGLDS--GTRIQSVLCLPIVTAIGDLIGILELYRHWGKGSFRLCHQQVATANLAWASVAI 249

  Fly   573 RNAQLYEKSQLEIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEADKGS 637
            ...|:......:.:.|..|||:::..|:....|:.::..|:.:.::|:...|..:..|...:|..
 Frog   250 HQVQVCRGLAKQTELNDFLLDVSKTYFDNIVAIDSLLEHIMIYAKNLVNADRCALFQVDHKNKEL 314

  Fly   638 FSRVFDFEANDLSEEEATSRTSPYESRFPINIGITGHVATTGETVNVPNAYEDDRFDASVDENSC 702
            :|.:||....| ..:....:|.  |.||.|..||.|.||.|||.:|:|:||.|.||:..||..:.
 Frog   315 YSDLFDIGEED-EGKPVFKKTK--EIRFSIEKGIAGQVARTGEVLNIPDAYADPRFNREVDVYTG 376

  Fly   703 FKHRSILCMAIKNSLGQIIGVIQLINKFNELDFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAM 767
            :..|:||||.|. ..|.:|||:|::||.:...|:|.|||..:.||:||.:.:|..:||.:...:.
 Frog   377 YTTRNILCMPIV-IRGSVIGVVQMVNKLSGSAFSKTDENNFKMFAVFCALALHCANMYHRIRHSE 440

  Fly   768 AKQSVTLEVLSYHASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDF 832
            ....||||.||||:..|.||...|....:|.::...:..:.||...|||   |...:.:::....
 Frog   441 CIYRVTLEKLSYHSICTSDEWQNLMNCTLPVSLCREIELYHFDIQPFED---LWPAIYVYMIHQS 502

  Fly   833 VERFHIDYEVLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGC 897
            ..:...:.|.|||:.:|||||||.|.||||:||..|:..|:.||...|  :||.::|...|::.|
 Frog   503 CGKNCFELEKLCRFTMSVKKNYRRVPYHNWKHAVTVSHCMYVILQNNQ--EIFTDLERKGLLVAC 565

  Fly   898 LCHDLDHRGTNNSFQIKASSPLAQLYSTSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRV 962
            |||||||||..||:..|...|||.||||||||.|||.|.:.||...|:.|.:||||::|.:|:.:
 Frog   566 LCHDLDHRGYTNSYLQKFDHPLAALYSTSTMEQHHFSQTVSILQLEGHNIFSNLSSNEYEQVLEI 630

  Fly   963 LEDAILSTDLAVYFKKRGPFLESVSQPTSYWVAEEP-RALLRAMSMTVCDLSAITKPWEIEKRVA 1026
            :..||::||||:||..| ..||.:.|..:..:..:. |..|..:.||.|||.::||.|.:.:.:|
 Frog   631 IRKAIIATDLALYFGNR-KHLEDLHQMGALNLNNQAHRDRLIGLMMTACDLCSVTKLWPVTRLIA 694

  Fly  1027 DLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLPIYEAFATLSDKLEPLVE 1091
            |.:.:||:.:|| |.:.|.|:||.:|:|:|:||:|..|:.|.:::.:|.|...:.:.....||::
 Frog   695 DDIYAEFWTEGD-EMKRLGISPIPMMDRDKQDEIPQGQMGFYNAVAVPCYTTLSEIFPSTRPLLQ 758

  Fly  1092 GVRDNRGHW 1100
            ..::|...|
 Frog   759 ACKENLSQW 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pde11NP_001286044.1 GAF 420..582 CDD:214500 41/173 (24%)
GAF 611..762 CDD:214500 56/150 (37%)
PDEase_I 859..1094 CDD:278654 98/235 (42%)
pde10aXP_031757888.1 GAF 110..223 CDD:396252 37/130 (28%)
GAF 282..437 CDD:214500 57/158 (36%)
PDEase_I 529..761 CDD:395177 98/235 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I6990
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D114875at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.