DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kon and Fras1

DIOPT Version :9

Sequence 1:NP_001260539.1 Gene:kon / 35104 FlyBaseID:FBgn0032683 Length:2381 Species:Drosophila melanogaster
Sequence 2:XP_038947596.1 Gene:Fras1 / 289486 RGDID:1306516 Length:4014 Species:Rattus norvegicus


Alignment Length:2131 Identity:426/2131 - (19%)
Similarity:760/2131 - (35%) Gaps:591/2131 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 LNCLWKYPC--VEYNPCLKSGICSQHGVDGFICYCDQSYCIKADFQGPFKIFTETSPELELLYVS 444
            |.|..|..|  .::...||||.|....|.||..:.....|..       |::|.:      |:|:
  Rat  1056 LQCSHKDRCHLCDHGFFLKSGFCMPTCVPGFSGHSSNETCTD-------KVYTPS------LHVN 1107

  Fly   445 PMQLLEGGTAFLSPHFIDIILDLRRYPSLNEQSIIFHVVHQPKYGQLL------QYSAEKAIFVP 503
            ....|  |...:.|  :|..|...::.....:.::||:|..|..||||      :...|||    
  Rat  1108 GSLTL--GIGSMKP--LDFSLLNIQHQDGRVEDLLFHIVSTPTNGQLLLSRNGKEVQLEKA---- 1164

  Fly   504 CRTFNLVDLATDKLKYVHNGQENFNDHATL---DMQIFGDVHKIPENILGKHRFLLHANITPIND 565
             ..|:..|:...|:::||:.::....:.:|   |.|.|.:    |:        |::........
  Rat  1165 -GHFSWKDVNGKKVRFVHSKEKLRKGYFSLKISDQQFFSE----PQ--------LINIQAFSTQA 1216

  Fly   566 PPQLRLHSHKILRVIEGIERVLDVDLFNIDDPDSEPGNLIYTILPTQSPQETFGCFIVGGATTSA 630
            |..||   :::|.:.:|....:...|.:|.| |..|.:::..:|......:.........|:...
  Rat  1217 PYVLR---NEVLHISKGERAAITTQLLDIRD-DDNPQDVVLNVLDPPRHGQLLRTPPAPAASVYQ 1277

  Fly   631 FSQAEVNVGKVSYLYNSTTAESFSYELQLQVSDGIETSETVYLPVSV--HPLELRLVNNTGLIMI 693
            |...|::.|.:.|.::.  ::|.|..:..|.:||......::...:|  :...||||.|:.:.:.
  Rat  1278 FHVDELSRGLLLYAHDG--SDSTSDIIVFQANDGHSFQNILFRVKNVPKNDRALRLVTNSMVWVP 1340

  Fly   694 HKSSLPISTANL---SIGTNAVDDHIDIRYDIVKAPQHGVLQRLRQI----------------DG 739
            ....|.|:...|   :.|..|.|....|.:|   .||.|.:..|..:                ||
  Rat  1341 EGGMLKITNRILRAQAPGVRADDIIYKITHD---HPQFGEVVLLMNLPADSPAGPAEEGHHLPDG 1402

  Fly   740 SWVN-VDWFSDSQLLLGHIRYLHSSDFPWQDEFKFIASFGFVTT------QTFDFRITFTRLRIT 797
            .... |..||...:..|.:.|.||......|.|.|..|   ..|      |:..|.|......:.
  Rat  1403 RMTTPVSTFSQQDIDDGIVWYRHSGATAQSDSFHFQVS---TATNAQEHPQSHMFNIAILPQALE 1464

  Fly   798 STRPSQISINGSREILLTSDVLSYETTPIGSFARS------VIYKITKPTRYGGIYVEGSRKAAK 856
            :.:   :|:..|..:....|.||.......||.::      :||.||.|.......:|...:...
  Rat  1465 APK---LSLGTSLHMTAREDGLSVIHPQSLSFGKAESPSGKIIYNITVPLHPNQGVIEHRGRPNS 1526

  Fly   857 KLDSFTQQDIEKRRIRYQ-----THHTSYSSFS-----DHLEFVVSVAECDDVA-------GVLE 904
            .:..|||::|.:.:|.|:     .|...:.:||     :.:.|..:|::....:       .:|.
  Rat  1527 PIRYFTQEEINQGQIMYRPPAAPPHLQEFMAFSFAGLPESVRFYFTVSDGQHTSPEMALTIHLLH 1591

  Fly   905 INYRPPDELINKLGYQNHEP-LQVQEGERALITKNHFGIRFNIY------ESLQFQVSLSPEHGV 962
            .:.:||       .:|...| |:|..|.|..:     |::..:.      |.|.||:...|:||:
  Rat  1592 SDRQPP-------AFQIKAPLLEVSPGGRTPL-----GLQLVVRDAEVVPEELFFQLQKPPQHGM 1644

  Fly   963 ICKYDEQTGLTTPV-EMFTLEQLFRNDIYYCHDDTESTRDTFELLILSGDETDLQFVSNMEV--- 1023
            :.||..::.:|... :.||.:::.||.:.|.||.:.:..|..|:.:     ||...|:..||   
  Rat  1645 LMKYTAKSSVTMSAGDTFTYDEVERNVLQYVHDGSPAWEDNMEISV-----TDGLTVTTSEVKVE 1704

  Fly  1024 --------------------------------HIKLVNDNEPYRTAIERVFHVVRNGI--RTLNP 1054
                                            |:..|:|:.|......::..:...|:  :|..|
  Rat  1705 VSPSENREPRLAPGSSLSMTVASQHTAIITRSHLAYVDDSSPDSEIWIQLSSLPLYGVLLKTSGP 1769

  Fly  1055 TVLQYLDADVN-----TNHTDIHYIHVSSTNGAFYKSGHYIDSFTQDDIANRRIMFQHTGADSGT 1114
            . ::.|..|.|     .|..:|.|..|..|.|.....|.:   |:..|:.|.|:       |:..
  Rat  1770 D-MEELSGDSNFTMEDINSKNIRYSAVFETEGQSVTDGFH---FSVSDMDNNRV-------DNQV 1823

  Fly  1115 ASFIVTDREHEVNGLLEIRASDPFVSMMATNASIVQEGKFVVLKNKDFILETNLDMKLDEIYYEV 1179
            .:..||..|           :.|.:...|...::.:.|:..:..:..|..|...:::.|.: .::
  Rat  1824 FTITVTPAE-----------NPPHIIAFADLITVDEGGRAPLSLHHFFATEDQDNLQGDAV-IKL 1876

  Fly  1180 IKPPSYGILMYLSRANEGENGTTIYKATNYTSLSNFTHLDIERERLVYWNTEIASMDKV------ 1238
            ...|.||.:     .|.| .|.......|....::|...|:....:.|:.:...|::..      
  Rat  1877 SALPKYGCI-----ENTG-TGDRFGPGANSELEASFPIQDVLENYIYYFQSVHESIEPTHDVFSF 1935

  Fly  1239 -------RYRVHIKNITAE---GEVMFRIYPSAYWEPLQVKQNHTLYVEESTSVLISRDVLEVVH 1293
                   |..:|..|||.|   .|.     |.....||.|:.        |:.|.||...|.:..
  Rat  1936 YVSDGSGRSEIHSINITIERKNDEP-----PRMTLRPLGVRL--------SSGVAISNSSLSLQD 1987

  Fly  1294 PNISPGDITFLVTSSPMHGYLEMQSMSFDDEYNCKVFDQSSVNTEK------MFYIQAGVNQSTD 1352
            .:....::.|::...|.||||.::..:.|...|..|.||.|..|.:      :.|:...:..:.|
  Rat  1988 LDTPNNELIFVLMKKPDHGYLLLRPTASDPLENGTVLDQGSSFTYQDILAGLVGYLPGDIYMAVD 2052

  Fly  1353 YFVFDVTNGI---TWLRQLMIKIVIIPEKLYMHSNIISVVEGKTVQLNPTDIQPYSEYY------ 1408
            .|.|.:|:|:   |...::.|::..        |||..:...:.:||:...:...:|.:      
  Rat  2053 EFRFSLTDGLHVDTGRMEIYIELPT--------SNIPHLAINRGLQLSAGSVARITEQHLRATDT 2109

  Fly  1409 ---RGKILEYIVTITPSSGHV----------LAGNSKVKRFTQKQLEQGSIQYVHNGSENATDSI 1460
               .|::: |||...|.:||:          ::....::.|||..:.||.|:|.|...|......
  Rat  2110 DSEAGQLV-YIVKEDPGAGHLQMTKADKLEQISVRGPIRSFTQADVSQGQIEYSHGPGEAGGSFA 2173

  Fly  1461 TLVAMARNKESVPFELEFAVVQVNDEE-PMMVTNTGLQVWNGGRYVIKNTDLLAQDYDTPPENLT 1524
            ....:...:.:...:..|::..:.|:. |:::||.||.:.......|....|||.|.|:.|..|.
  Rat  2174 FKFDVVNGEGNKLADQSFSINVLEDKSPPVIITNKGLVLDENSVEKITTAQLLATDQDSKPTELI 2238

  Fly  1525 F-VVNHIYGGYLARKSAPHQKIEHFTQAQINLEEIYFMHDSNSRR--NELSFVVTDGLFNTTTQM 1586
            : :.:....|:|...::|..:|..||||.:....:.::|.|.:.:  :..|||::||| :..||.
  Rat  2239 YRITSQPQLGHLEHVASPGIQISSFTQADLTSRNVQYVHSSGTGKLSDAFSFVLSDGL-HEVTQT 2302

  Fly  1587 LNIEIKPIEILAEHNENLHVFPLTKKQILRDYLHFKCSDEEREIRYNITVPPSLGRIVNEFIDNG 1651
            .:|.|.|::      ::|   ||.:.:.:|                               :..|
  Rat  2303 FSITIHPVD------DSL---PLVQNRGMR-------------------------------VQEG 2327

  Fly  1652 FTKEVSEFTQNDVDNGHIFYEHTAVIMEFRTNDSFYFDVVAERSDRLLNQKFNIEISVSSGGLLR 1716
            ..|.::||....||                      .|..||          :|..::       
  Rat  2328 VRKTITEFELKAVD----------------------VDTEAE----------SITFTI------- 2353

  Fly  1717 FLPVNKLNVDEGGSVPIKLDFSKILEYLKTKAGINNPELFIEAIQKPTHGNI---GLGHEFKHMQ 1778
                                                       :|.|.||.|   ..|..::...
  Rat  2354 -------------------------------------------VQPPRHGTIERTARGQRYQLTS 2375

  Fly  1779 RYHPSDFFTKKVYYIHDHSDTLEDTILMSVYLTQGNIFLCN-------LTIP----VSINPINDQ 1832
            .:...|.:..:|.|.||.|::|:|....:|.......|:..       ...|    |.|.|::|.
  Rat  2376 SFTMEDIYQNRVSYSHDGSNSLKDRFTFTVSDGTNPFFIIEEGGEEIMTAAPQQFLVDILPVDDG 2440

  Fly  1833 PFHLVTH--LPQMTVVEGE-NRTITRNDLLTEDADTPPEEIIYDVMSGPTLGVLRKITNDGRPED 1894
            ...:||:  |..:..::|: ...||:.:|||.|.||...::.|:|.:||..|.:......||   
  Rat  2441 TPRIVTNLGLQWLEYMDGKATNLITKKELLTVDPDTEDSQLTYEVTTGPMHGYVENKLQPGR--- 2502

  Fly  1895 LLAFSNQFTQADINNDRIIYVHFG---MPQSTTFCFTVSDGQSNPA--------YEIFTIKIDSI 1948
               .:..|||..:|...|.||.:.   .....:|.|.|.|.:.|..        :.:.:.|..|.
  Rat  2503 ---VAATFTQEHVNLGLIRYVLYEEKIQKMMDSFQFLVKDSKPNVVSDNIFYIHWSLISFKYTSY 2564

  Fly  1949 HLQPSAMQAPVKVQ----------------QGATTAPMRL-------DHIGVSTNVHMERL---- 1986
            ::...|....|.||                ||..::..|:       |::..:..|..:..    
  Rat  2565 NVSEKAGSVSVMVQRTGNLNQYAIVLCRTEQGTASSSSRVSSHPGQQDYVEYAGQVQFDEREDTK 2629

  Fly  1987 ----------------SYNVTNS-PLFGII-----------VYKHQPTLRFTQQQLETSQ-ISYM 2022
                            |:.|..| |.:.::           ..:.:|||.|.::....:: ..::
  Rat  2630 SCTIVINDDDVFENIESFTVELSMPAYALLGEFTQAKVIINDTEDEPTLEFDKKTYRVNESAGFL 2694

  Fly  2023 QTDLNRSND-SFQVSAY---VP-------------GTNYVAQ---VDVVMEVEP--------VIQ 2059
            ...:.|..| |..|||.   ||             |:::.::   |:..:.:.|        |:.
  Rat  2695 FAPIKRQGDPSSAVSAICYTVPKSAMGSSLYALESGSDFKSRGRSVESRVLLGPGVTTSTCDVMV 2759

  Fly  2060 INDIVMKEAE---------SSGGKI------KLITSLDND-NPLSLKLNKFNPKFVITRMPSTGQ 2108
            |:|...:|.|         |:..:|      |::.|..|| :.:||.    |..|.|:....|.:
  Rat  2760 IDDSEYEEEEEFEIALADASNNARIGRLAVAKVLISGPNDASTVSLG----NTAFTISEDAGTVK 2820

  Fly  2109 IRKIIRSTGLTTDGQSDRSTNIFSYKELRSGVVYFVPHESVEETEADHDSFDYQLLIKTVQPAQA 2173
            :..|...|.|:|      .|:::                               ...:...||.|
  Rat  2821 VPVIRHGTDLST------FTSVW-------------------------------CATRPSDPASA 2848

  Fly  2174 TVSIEYRSRVEETETVHLGSAGLSINYLAI------------GCAIFIVLI 2212
            |..::|   |..:..|..| .|::..|..:            |...|:|.:
  Rat  2849 TPGVDY---VPSSRKVEFG-PGVTEQYCTLTILDDTQYPVIEGLETFVVFL 2895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
konNP_001260539.1 LamG 30..176 CDD:238058
LamG 211..365 CDD:238058
Cadherin_3 507..664 CDD:292802 30/159 (19%)
Cadherin_3 631..776 CDD:292802 39/166 (23%)
Cadherin_3 747..892 CDD:292802 37/166 (22%)
Cadherin_3 861..1005 CDD:292802 39/168 (23%)
Cadherin_3 979..1121 CDD:292802 37/183 (20%)
Cadherin_3 1093..1242 CDD:292802 26/161 (16%)
Cadherin_3 <1264..1361 CDD:292802 26/102 (25%)
Cadherin_3 1330..1464 CDD:292802 34/161 (21%)
Cadherin_3 1436..1578 CDD:292802 37/145 (26%)
Cadherin_3 1789..1932 CDD:292802 43/159 (27%)
Cadherin_3 2009..2163 CDD:292802 34/198 (17%)
Fras1XP_038947596.1 VWC 27..86 CDD:214564
VWC 94..151 CDD:278520
VWC 158..>198 CDD:327433
VWC 224..277 CDD:278520
VWC 284..341 CDD:214564
VWC 368..415 CDD:327433
VSP 405..780 CDD:146106
VSP 728..1059 CDD:146106 1/2 (50%)
FU 1045..1086 CDD:214589 10/29 (34%)
Cadherin_3 1101..1197 CDD:406568 25/110 (23%)
Cadherin_3 1202..1309 CDD:406568 21/124 (17%)
Cadherin_3 1313..1440 CDD:406568 30/129 (23%)
Cadherin_3 1448..1576 CDD:406568 27/130 (21%)
Cadherin_3 1579..1693 CDD:406568 30/130 (23%)
Cadherin_3 1703..1813 CDD:406568 18/113 (16%)
Cadherin_3 1822..1940 CDD:406568 20/135 (15%)
Cadherin_3 1943..2061 CDD:406568 34/130 (26%)
Cadherin_3 2081..2181 CDD:406568 19/100 (19%)
Cadherin_3 2188..2295 CDD:406568 28/106 (26%)
Cadherin_3 2297..2408 CDD:406568 34/232 (15%)
Cadherin_3 2427..2539 CDD:406568 34/117 (29%)
Calx-beta 2555..2652 CDD:413355 13/96 (14%)
Calx-beta 2677..2763 CDD:413355 16/85 (19%)
caca <2782..>3049 CDD:273296 29/159 (18%)
Calx-beta 3041..3135 CDD:413355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 45 1.000 Domainoid score I11855
eggNOG 1 0.900 - - E1_KOG3597
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.