DRSC/TRiP Functional Genomics Resources

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Protein Alignment kon and nlr-1

DIOPT Version :9

Sequence 1:NP_001260539.1 Gene:kon / 35104 FlyBaseID:FBgn0032683 Length:2381 Species:Drosophila melanogaster
Sequence 2:NP_502312.2 Gene:nlr-1 / 178167 WormBaseID:WBGene00003772 Length:1180 Species:Caenorhabditis elegans


Alignment Length:871 Identity:176/871 - (20%)
Similarity:312/871 - (35%) Gaps:246/871 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 GYVSMPLQEAKMSTNIRVKFRTRQENAFLFLAAGRTDYCLLRLESGLISFSYKIERDVVQLRSPK 100
            |.|||      ...::.|.|||.:...|.|..|.:.|..:.::..|.:...:.. ..:...|...
 Worm   141 GLVSM------YENDLCVVFRTYRSGVFFFSMADQGDVLIAQIIHGTVHVIFDF-GSLTPSRISA 198

  Fly   101 KQKLNDLEWHDVAVQRFENNITLQVDGYIMRKQLP-GDLAALNIHFGTFLGG-VGDFTAEFLDDV 163
            .:.|:|..||::......:::.|.:||.::.:..| |....|::|....:|| ..|..::.::..
 Worm   199 GKALDDGRWHEMRWLHQFDSVQLSIDGVLLNQTAPTGLYRKLDLHSVVHIGGRPNDDFSQGIETT 263

  Fly   164 IGFRGCISDVFYNNINIIKRAKDRTSHTTSTGVAWTCSTEFEGSIQDSISFMRNDSYSLMMKESY 228
              |.|||:.:..||.::::.:.:...:              :..:....||..::|...::..::
 Worm   264 --FTGCIARLQLNNADLLQLSPNEVHN--------------QCQMPKPPSFTLHNSSRAVLPFTF 312

  Fly   229 AMGETLSLQFRTMASAG--VIFF---NGG-YDFILLEIEDQHLKVTFNKAGSLVQFMTNEH---- 283
            .   ..|.:||.:...|  |..|   ||. .|.::.|....||      ..::.:|....:    
 Worm   313 L---PFSFEFRIVPINGPLVTLFDAENGTLVDVVIDEESKLHL------VSNITKFKQAANPAID 368

  Fly   284 ISDGKWHRVFLRYNAAIAELSLDDATSGYRGTHANETKASINLEKSVFFGGVQEEMRRRLISKGL 348
            ::||.||...||......|:.:|..|..:...|                     |:||  :|:.|
 Worm   369 VADGAWHSFSLRIRGVRMEIDIDGYTVLWLEGH---------------------EVRR--VSQRL 410

  Fly   349 RINEISFKGCMRDILVNDLPLGFAEMTISRSLALNCLWKYPCVEYNPCLKSGICSQHGVDGFICY 413
            ....:|..||.|.:.: ||.....:..::|.   .|.::..|:. |||...|.|.|..:|.::|.
 Worm   411 SNFILSASGCYRSVTI-DLTSVRVDGNVTRG---ECTFQEKCLP-NPCENGGGCVQSALDDYVCN 470

  Fly   414 CDQSY----CIKADFQGPFK--IFTETSPELELLYVSPMQLLEGGTAFLSPHFIDIILDLRRYPS 472
            |.:.|    |...|.....:  :||:.:.:..:.....:..::|| ..:.|  |::.....|   
 Worm   471 CKEGYKGKNCHTTDLPHSCEEWVFTKGNKQKAVQGRKVLIDIDGG-GEMQP--INVTCKTER--- 529

  Fly   473 LNE------QSIIFHVVHQP-------KYGQLLQYSAEKAI-----------FVPCRTFNLVDLA 513
             :|      .:|:.|.:.:|       |.| .::||....|           |..|..|      
 Worm   530 -DEIGIDGVSTILEHDLLRPMIVTGDNKPG-AVRYSLTYGISTEQMDRLVEGFEACSQF------ 586

  Fly   514 TDKLKYVHNGQENFNDHATLDMQIFGDVHKIPENILG----KHRFLLHANITPINDPPQLRLHSH 574
               ::|...|      .|.|..|  || .:.|.:...    ||      .:.....||..|:.| 
 Worm   587 ---MRYTCRG------GARLMTQ--GD-ERSPSSWYSTRSDKH------GLQWGEAPPYSRMCS- 632

  Fly   575 KILRVIEGI---ERVLDVDLFNIDDPDSEPGNLIYTILPTQSPQETFGCFIVGGATTSAFSQAEV 636
               ..|.|.   .|:.:.|  :.:|...|..|....:||..      |.|: ||.|.|  |..||
 Worm   633 ---CAINGSCLHNRMCNCD--SGEDSTDEGVNPYSQLLPVT------GLFL-GGTTKS--SSIEV 683

  Fly   637 NVGKVSYLYNSTTAESFSYELQLQVSDGIETSETVYLPVSVHPLELRLVNNTGLIMIHKSSLPIS 701
            .:|.:. ..|..|.:..::..:.....|.:|.......||:|                   :..|
 Worm   684 EIGPLK-CRNRATFDPVTFSNRNAKLSGAQTFNQRTFDVSLH-------------------VKFS 728

  Fly   702 TANLSI-GTNAVDD----HIDIRYDIVKAPQHGVLQRLRQIDGSWVNVDWFSDSQLLLGHIRYLH 761
            .:.:|| ..::.||    |:.:...              :|.|..||   ..:||.::...||  
 Worm   729 HSQMSILSWHSTDDLHWFHLYVNDG--------------KIVGEVVN---GGESQQIVSEHRY-- 774

  Fly   762 SSDFPWQDEFKFIASFGFVTTQTFDFRITFTRLRITSTRPSQISINGSREILLTSDVLSYETTPI 826
                   |:.||.|.: :....|..|                :.::|.|:.:.||.:|       
 Worm   775 -------DDGKFHAIY-WEADSTGMF----------------LKVDGQRKSVKTSFIL------- 808

  Fly   827 GSFARSVIYKITKPTRYGGIYVEGSR 852
                         ||.|  :::.|||
 Worm   809 -------------PTVY--MWIVGSR 819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
konNP_001260539.1 LamG 30..176 CDD:238058 32/141 (23%)
LamG 211..365 CDD:238058 35/163 (21%)
Cadherin_3 507..664 CDD:292802 36/163 (22%)
Cadherin_3 631..776 CDD:292802 28/149 (19%)
Cadherin_3 747..892 CDD:292802 21/106 (20%)
Cadherin_3 861..1005 CDD:292802
Cadherin_3 979..1121 CDD:292802
Cadherin_3 1093..1242 CDD:292802
Cadherin_3 <1264..1361 CDD:292802
Cadherin_3 1330..1464 CDD:292802
Cadherin_3 1436..1578 CDD:292802
Cadherin_3 1789..1932 CDD:292802
Cadherin_3 2009..2163 CDD:292802
nlr-1NP_502312.2 Laminin_G_2 154..275 CDD:280389 27/123 (22%)
EGF 448..479 CDD:278437 11/31 (35%)
LamG 717..836 CDD:238058 34/187 (18%)
EGF_CA 865..896 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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