DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kon and frem3

DIOPT Version :10

Sequence 1:NP_609881.3 Gene:kon / 35104 FlyBaseID:FBgn0032683 Length:2381 Species:Drosophila melanogaster
Sequence 2:XP_002940127.3 Gene:frem3 / 100485452 XenbaseID:XB-GENE-6257844 Length:3125 Species:Xenopus tropicalis


Alignment Length:2381 Identity:494/2381 - (20%)
Similarity:831/2381 - (34%) Gaps:726/2381 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 DDATSGYRGTHANETKASINLEKSVFFGGVQEEMRRRLISKGLRINEISFKGCMRDILVNDLPL- 369
            |...||.........:..:.|.:|||...||:          |.|.......|:..:|.|| || 
 Frog    29 DSRLSGPDNIIVTNRRIRVPLGRSVFLDPVQD----------LAIQVQPGDSCILRVLAND-PLS 82

  Fly   370 ---GFAEMTISRSLALNCLWKYPC------VEY------NPC-------LKSGICSQHGVDGFIC 412
               ||  :|..|         :||      |||      :|.       ||....:...:..|:.
 Frog    83 QRPGF--LTPKR---------FPCDFGAGEVEYTHLGARSPASDRVRMQLKYDSPTHTWIVPFVI 136

  Fly   413 YCDQSYCIKADFQGPFKIFTETSPELELLYVSPMQLLEGGTAFLSPHFIDIILDLRRYPSLNEQS 477
            .      ::..|| ..:|.|...|   ||..||.:        :||.....:|.. .|....|..
 Frog   137 E------VELIFQ-QLEIVTRNLP---LLVDSPRE--------ISPPVDKKVLGF-SYDPTKESC 182

  Fly   478 IIFHVVHQ---PKYGQLLQYSAEKAIFVPCRTFNLVDLATDKLKYVHNGQENF--NDHATLDMQI 537
            .|..::..   |:|||||..:|...:...|.||     ....|:|.|...:|.  .|:..:..|:
 Frog   183 KISPLIGTGGLPRYGQLLNGTAAPQLVTDCHTF-----INSGLRYQHTAPQNSPNRDYVPMLAQL 242

  Fly   538 FGDVHKIPENILGKHRFLLHANITPI------NDPPQLRLHSHKILRVIEGIERVLDVDLFNIDD 596
             .|.|.:...        .|..:|.:      |..|:....|..::.|.:.:...|..::...:|
 Frog   243 -NDGHGVARQ--------EHFQLTVMIKGGAENTAPRPSFVSMMMMEVGQFVLTALTPEMLAAED 298

  Fly   597 PDSEPGNLIYTILPTQSPQETFGCFIV---GGATTSAFSQAEVNVGKVSYLYNSTTAESFS---Y 655
            .:||||.||:.:..:..| ||.|..|.   .....::|.|.::...:::  |....:||:.   .
 Frog   299 AESEPGELIFNVTSSLDP-ETSGYLISTDDRNLPITSFYQRDLMELRIA--YQPPASESWQERII 360

  Fly   656 ELQLQVSD--GIETSETVYLPV-----SVHPLELRLVNNTGLIMIHKSSLPISTANLSIGTNAV- 712
            :|::.|.|  |..:....::.|     ::.||..|   |.||.::...|.|:|.....:....: 
 Frog   361 QLEMHVIDTEGASSDYFAFMIVVKPMNTLAPLATR---NAGLRLLEGQSRPLSGPGSGMNNLVIS 422

  Fly   713 -DDHID-IRYDIVKAPQHGVLQRLRQIDGSWVN---VDW-FSDSQLLLGHIRYLHSSDFPWQDEF 771
             :|::| :|..::...:||  |.:.....|..|   .|: ||..:|..|.:.|.|.....:.|  
 Frog   423 DEDNLDQVRISVIDGLRHG--QLILSPSDSGTNSGHKDFSFSPQELHSGLVIYQHDGSDTYSD-- 483

  Fly   772 KFIASFGFVTTQTFDFRITFTRLRI----------TSTRPSQISIN---GSRE---------ILL 814
                        ....|:...:.|:          |...|..::.|   ..||         :|.
 Frog   484 ------------NLILRLDDGKHRVELLYPISVAPTDDEPPVLNANTGLNLREKGLALISPFMLS 536

  Fly   815 TSDVLSYETT-------PIGSFARSVIYKITKPT-----RY---GGIYVEGSRKAAKKLDSFTQQ 864
            .:|:.|.::|       |:|.....::.:..:|.     :|   .|||.:|       :..:.|:
 Frog   537 ATDIDSEDSTIHFVLQEPLGRLGEMLLRQPDEPEGEEGWKYLPQEGIYEKG-------VIEWYQK 594

  Fly   865 DIEKRRIRYQ---THHTS-------YSSFSDH--------LEFVVSVAECDDVAGVL-------- 903
            ||...::.|:   :|.|:       :....||        ..|:|.:...||:...|        
 Frog   595 DILDGKLHYRHLGSHSTTTVLDRVLFVVLDDHDPPNQSNEQVFMVRIEPLDDIPPELYPGTTLHM 659

  Fly   904 -------------EINYRPPDELINKLGYQNH-EPLQVQEGERAL----ITKNHFGIRFNIYESL 950
                         .:.|...|....:|.|..| .|........||    :..:..|:..|.:...
 Frog   660 TVKEYEVTPFRKKYLRYTDLDTDDRELKYTLHSHPRDTDPNHPALTGQIVLSDSLGVEVNQFTQA 724

  Fly   951 Q---FQVSLSPEHGVICKYDEQTGLTTPVEMFTLEQLFRNDIYYCHDDTE--STRDTFELLILSG 1010
            |   .::|..|.       :::.|: .|.|:         ...|..:|.|  |.:.||.::    
 Frog   725 QINHLKISYKPP-------EKELGI-VPREL---------QFNYTVEDAEGNSVQGTFTIV---- 768

  Fly  1011 DETDLQFVSNMEVHIKLVNDNEPYRTAIERVFHVVRNGIRTLNPTVLQYLDADVNTN-------- 1067
                ||.|           ||:|.... ...|.|...|..||....|...|.|.:|:        
 Frog   769 ----LQPV-----------DNKPPEIT-NTGFTVPERGSFTLTKNELDATDQDTDTSNIIFSLSE 817

  Fly  1068 ---HTDIHYIHVSSTNGAFYKSGHYIDSFTQDDIANRRIMFQHTGAD--SGTASFIVTDREHEVN 1127
               |.::.|..|..:.|         :||...||:...:.:.|:|.:  |.|.|.:|:|..|||.
 Frog   818 APQHGELQYQGVPMSLG---------ESFALSDISLGWVSYVHSGEETTSDTCSLVVSDGVHEVP 873

  Fly  1128 GLLEIRASD-----PFV----SMMATNASIVQEGKFVVLKNKDFILETNLDMKLDEIY--YEVIK 1181
            ..:.|:...     |.:    .::.::..:::.|:..:..:    :....|...|::.  :.|.:
 Frog   874 ITVRIKVKPVDDEAPILMLAAGLLGSSIEVLERGETEITSS----VVQGTDPDTDDLMLTFIVEE 934

  Fly  1182 PPSYGILMY----LSRANEGE--NGTTIYKAT--------NYTSLSNFTHLDIERERLVYWNTEI 1232
            ||..|.::.    ..|.::.:  ||...|..|        .:.|. |.|..|:..|.:|..|   
 Frog   935 PPRKGDILVNGVTAERFSQQDLLNGAVTYVHTFGEIGLQKQHDSF-NLTLSDLSDEWVVGGN--- 995

  Fly  1233 ASMDKVRYRVHIKNITAEGEVMFRIYPSAYWEPLQVKQNHTLYVEESTSVLISRDVLEVVHPNIS 1297
             .:..||.:|.|..:.:|..|            :.:|:..:  |.|....:|:.:.|:....:..
 Frog   996 -KVQGVRVQVTILPVDSEAPV------------VTLKEKFS--VLEGEKNVITYENLDADDKDTP 1045

  Fly  1298 PGDITFLVTSSPMHGYLEMQSMSFDDEYN-----CKVFDQSSVNTEKMFYIQA---GVNQSTDYF 1354
            ..||...:...|..||:|..|.:...|.:     ...|....:....::|:|:   ||....|.|
 Frog  1046 KDDILCTIIVQPTSGYVENISPAPGSEKSRSGTAVSAFTIRDIRLGHIYYVQSIHQGVEPQEDRF 1110

  Fly  1355 VFDVTNGITWLRQLMIKIVIIP---EKLYMHSNIISVVEG-----KTVQLNPTD-IQPYSEYYRG 1410
            .|..::||:..::|...|||||   ||..:.:....|:||     .|..||..| .||..|    
 Frog  1111 TFHCSDGISSSQRLFFPIVIIPTNDEKPELFTREFVVMEGMSLVIDTPILNAADGDQPPDE---- 1171

  Fly  1411 KILEYIVTITPSSGHVL----AGNSKVKRFTQKQL-EQGSIQYVHNGSENATDSITLVAMARNKE 1470
              |.:|::..|..|.|:    .|...:..||.::: |..||.|.|:.||...||..:: :...:.
 Frog  1172 --LTFIISKPPLHGRVVQQQATGTVPILNFTLEEIKESSSIVYEHDDSETKEDSFEII-LTDGEH 1233

  Fly  1471 SVPFELEFAVVQVNDEEPMMVTNTGLQVWNGGRYVIKNTDLLAQDYDTPPENLTFVVNHIYG--- 1532
            :|..::...|:.|:||.|.|..|.||::..|...||.|..|.|.|.|:..::|.:|:.  :|   
 Frog  1234 NVIKKVLIMVIPVDDETPRMAINDGLEIDIGESKVITNRVLKATDLDSDDKSLAYVIR--FGPSQ 1296

  Fly  1533 GYLARKSAPHQKIEHFTQAQINLEEIYFMHDSNSRRNELSFVVTDGLFNTTTQMLNIEIKPIEIL 1597
            |:|.|                                                            
 Frog  1297 GFLQR------------------------------------------------------------ 1301

  Fly  1598 AEHNENLHVFPLTKKQILRDYLHFKCSDEEREIRYNITVPPSLGRIVNEFIDNGFTKEVSEFTQN 1662
                                      .|:...:..|||    ||               ..|||.
 Frog  1302 --------------------------LDKHGSVVGNIT----LG---------------MNFTQE 1321

  Fly  1663 DVDNGHIFYEHTAVIMEFRTNDSFYFDVVAERSDRLLNQKFNIEISVSSGGLLRFLP--VNK-LN 1724
            |:|.|.|.|.|..   :....|.|.|| :.:..:..:::.|.|.|    |.:....|  :|| :.
 Frog  1322 DIDRGLIRYTHAG---QEGIRDLFKFD-ITDGINPFIDRYFYISI----GSIDIVFPDVINKGVT 1378

  Fly  1725 VDEGGSVPIKLDFSKILEYLKTKAGINNPE--LFIEAIQKPTHGNIGLGHEFKHMQRYH----PS 1783
            :.|||.|.:..|       |.:.:.||:|:  |.....:.|:.|         |::...    |.
 Frog  1379 LKEGGKVTLTTD-------LLSTSDINSPDENLRFSITRAPSRG---------HLESTDAPGVPI 1427

  Fly  1784 DFFTK------KVYYIHDHSDTLE-DTILMSVYLTQGNIFLCNLTIPVSINPI-NDQPFHLVTHL 1840
            ..||:      ||||||...|.:: |:....|......:|   .|..|||..: |.:|..::..|
 Frog  1428 TSFTQLQLAGNKVYYIHTSEDEMKIDSFEFEVTDGYNPVF---RTFRVSITDVDNKKPVLMINGL 1489

  Fly  1841 PQMTVVEGENRTITRNDLLTEDADTPPEEIIYDVMSGPTLGVLRKITNDGRPEDLLAFSNQ---- 1901
               .|.||||:.||..:|..||.|||...:.:.:...|..|             .:.|:|.    
 Frog  1490 ---VVNEGENKLITPFELSVEDRDTPDNLLRFTITQVPVHG-------------QIVFNNSQTVT 1538

  Fly  1902 -FTQADINNDRIIYVHFGMPQ-STTFCFTVSDGQSNPAYEIFTIKIDSIHLQPSAMQAPVK---- 1960
             ||:.|:|.:.|.|.|.|... ..:|.|||:||.....:.:.....:|  .:|..|:..:.    
 Frog  1539 TFTKQDLNENLISYKHDGSESVEDSFSFTVTDGTHAEFFVLPDTTFES--KKPQMMKIRINSLDN 1601

  Fly  1961 ------VQQGATTA----PMRLDHIGVSTNVHME-------RLSYNVTNSPLFGIIV---YKHQP 2005
                  |.:||.|.    |.:|.....|.::..|       .|.|.:.:.|..|.:|   :.:..
 Frog  1602 GVPQLIVNKGAPTLRSLHPGQLGFTITSKSLKAEDRDSPHKMLKYRILDGPKHGFLVNLDHGNDS 1666

  Fly  2006 TLRFTQQQLETSQISYMQTD-LNRSNDSFQVSAYVPGTNYVAQVDVVMEVEPVIQINDIVMKEAE 2069
            ...|||..::..:|.|:..| .|.:.|.|..|                       :.||      
 Frog  1667 IRTFTQGDIDDMKICYVLKDGDNATGDIFHFS-----------------------VEDI------ 1702

  Fly  2070 SSGGKIKLITSLDNDNPLSLKLNKF----NPKFVITRMPSTGQIRKIIRSTGLTTDGQSDRSTNI 2130
             .|.|::......|...:|::.:.:    :.||:...:...|.:.:....:..|.||.:.:..: 
 Frog  1703 -GGNKLRSQQFRLNWAWISMEKSHYTVDEDSKFLEVTLKRRGYLGETSFISITTKDGTATKDKD- 1765

  Fly  2131 FSYKELRSGVVYFVPHESV-------------EETEADHDSFDYQLLIKTVQPAQATVSIEYRSR 2182
              :|......|.|.|.::.             |.:|..|......::.....|.:||:.|     
 Frog  1766 --FKGKAQKQVQFNPGQTTATWKVRILADNEYENSETFHVILSEPVMAALEFPIEATIEI----- 1823

  Fly  2183 VE--ETETVHLGSAGLSINYLAIGCAIFIVLICLLIVLLILKIRKLRKHKADISKDQPPALPCPP 2245
            |:  :..||::..|...|.. .||             .||:.|    |...|||:          
 Frog  1824 VDPGDESTVYIPQAEYKIEE-DIG-------------ELIIPI----KRSGDISQ---------- 1860

  Fly  2246 DLTSVSPQHHLHHHHGHHYASSEADSVPATGNS-----TPLPGFSNI---------PHCKIIPVE 2296
            :|..|...|.          .:...:||::..|     |...|.::|         .:|::|.::
 Frog  1861 ELMVVCSTHQ----------GTATGTVPSSVLSYSDYITRADGHTSIIRFDKDETEKNCRVIIID 1915

  Fly  2297 SYKHEYPDYDPDE-------------------------EETDDQCDPQQMMLPQRY---NPYHME 2333
            ...     |:.||                         .:|||:        |..|   ..||::
 Frog  1916 DSL-----YEGDETFNVSLSMPMGGQLGEFPSTKVVILADTDDE--------PAFYFADTDYHVD 1967

  Fly  2334 HDA-------WSSSCDMANDFAGYASVPQSISGSVSSPPSA 2367
            ..|       |.:..|:..      :...::....|.|.||
 Frog  1968 ESAGYVEVRVWRTGTDLTK------AATVTVRSRKSEPLSA 2002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
konNP_609881.3 LamG 30..176 CDD:238058
LamG 211..365 CDD:238058 13/58 (22%)
Cadherin_3 <445..535 CDD:465048 22/94 (23%)
Cadherin_3 552..664 CDD:465048 27/125 (22%)
Cadherin_3 667..773 CDD:465048 26/117 (22%)
Cadherin_3 781..892 CDD:465048 28/165 (17%)
Cadherin_3 921..1005 CDD:465048 18/93 (19%)
Cadherin_3 1025..1121 CDD:465048 26/108 (24%)
Cadherin_3 <1149..1230 CDD:465048 18/96 (19%)
Cadherin_3 1264..1361 CDD:465048 21/104 (20%)
Cadherin_3 1369..1464 CDD:465048 34/108 (31%)
Cadherin_3 1470..1578 CDD:465048 24/110 (22%)
Cadherin_3 1821..1932 CDD:465048 36/117 (31%)
frem3XP_002940127.3 Frem_N 38..240 CDD:466034 57/247 (23%)
Cadherin_3 268..348 CDD:465048 18/82 (22%)
Cadherin_3 374..492 CDD:465048 27/136 (20%)
Cadherin_3 494..624 CDD:465048 24/136 (18%)
Cadherin_3 631..755 CDD:465048 22/140 (16%)
Cadherin_3 759..868 CDD:465048 32/137 (23%)
Cadherin_3 870..985 CDD:465048 20/119 (17%)
Cadherin_3 1002..1117 CDD:465048 25/128 (20%)
Cadherin_3 1121..1231 CDD:465048 35/116 (30%)
Cadherin_3 1239..1349 CDD:465048 42/220 (19%)
Cadherin_3 1354..1462 CDD:465048 32/127 (25%)
Cadherin_3 1464..1571 CDD:465048 37/125 (30%)
Cadherin_3 1589..1701 CDD:465048 25/134 (19%)
caca <1719..>1955 CDD:273296 49/294 (17%)
caca <1952..>2245 CDD:273296 13/65 (20%)
Calx-beta 2218..2288 CDD:413355
Blue background indicates that the domain is not in the aligned region.

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