DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10283 and Ccdc50

DIOPT Version :9

Sequence 1:NP_001163006.1 Gene:CG10283 / 35102 FlyBaseID:FBgn0032681 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_011244304.1 Gene:Ccdc50 / 67501 MGIID:1914751 Length:480 Species:Mus musculus


Alignment Length:625 Identity:127/625 - (20%)
Similarity:201/625 - (32%) Gaps:241/625 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VNEVCKEWLVREDGALAYKLQSQEINDFYKGNRYRNAVVREDFPTA---LHEQIKEKEQAQRRVD 84
            |.|||:::.|.||..||:.||.|||......|..||.:|:.|...|   ..|.:|.:.|.|:|..
Mouse    14 VKEVCRDFAVLEDHTLAHSLQEQEIEHHLASNIQRNRLVQHDLQVAKQLQEEDLKAQAQLQKRYK 78

  Fly    85 AYRRRLTEQEEHDKRVAKEIADKL-----ERDLQEQQQKELMQSELIAKQMQEIYVNLPPVPPPV 144
            |.       |:||..:|:||.:||     .|.:||::.::      ||:.:||            
Mouse    79 AL-------EQHDCEIAQEIQEKLTIEAERRRIQEKKDED------IARLLQE------------ 118

  Fly   145 TRDKSRPPPRPAKASIHLQQQQQTQQTQSTQQQHQPE---PSTSQQARYHSQLQQQQQQPLQLQQ 206
                                  :..|.:..:::|.||   .|......||....|.:        
Mouse   119 ----------------------KELQEEKRRKKHTPEFSGGSVFGDNYYHEDGDQSR-------- 153

  Fly   207 QHFSQTDNYVGLSLIPNIVDLPGATAAC-------TTPSRNAQAHNQLLVSDVLPSPQQQQQQHH 264
               |:.|..:|          .|.:..|       |...:....|.|..:.|:        ::||
Mouse   154 ---SRRDRELG----------SGHSKFCRLQNDGKTVRQKEKPRHQQKNLEDL--------EEHH 197

  Fly   265 SRFHH------------AQQPPQQQQHQSSSPARRARAPTNAITSATTNMPSTSSITQHPPTHTE 317
            .....            ||...:||:.:.|...|..::|...|..                    
Mouse   198 PSERSLPSASWGRGRDGAQTACEQQERKRSGQERLWKSPLPKIRG-------------------- 242

  Fly   318 HPADIDELVDYADVADSIRDYNIAATSATATSASVVDAAATSLQKQRSPSHENLL---------- 372
                  |:....|..|...|::....|....|......:..|.||...|..|.:.          
Mouse   243 ------EVFLSIDSEDWEADWSSGTRSPEKQSHHHGRLSPKSSQKTGLPCKEIVYGRDLGQGDHR 301

  Fly   373 --RTEPKFQKLSPEKYDQLVGNFGLGSVSGLGSGSVSGSGSGSAKAAERHMQQHADDIELYVDPC 435
              |..|:....|.:|      ......|:|:....:..:.|..|:|:.|       |.|.|    
Mouse   302 ERRHRPRTSPFSEDK------ELRHHHVAGMKPRGIKEAVSTPARASHR-------DQEWY---- 349

  Fly   436 DYASLREIGLPLEEIQEISKKMKQEQKDELLARRLQAIESKDCVRQEHRDRLLAIEAQDKELAKM 500
                          ..||::|:   |::||||              .|.|...|..|||:|:|::
Mouse   350 --------------DAEIARKL---QEEELLA--------------THVDMRAAQVAQDEEIARL 383

  Fly   501 LQDRMNSKKLFSCRYNYLGFRKEKAKAKRAKEKARLRKTQQKEAAEAANGNGNLLCGTNSHCGPL 565
            |                  ..:||...|:|||:.:....::|.                      
Mouse   384 L------------------MAEEKKAYKKAKEREKSSLDKRKH---------------------- 408

  Fly   566 LPLPPDC-LSSNANQSQADIDVEAYSNPIDVLNSSREQRP 604
               .|:| |.:.:..|::....||:.:.||     |..||
Mouse   409 ---DPECKLKAKSAHSKSKEGDEAHRSKID-----RPSRP 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10283NP_001163006.1 RILP-like 14..132 CDD:304877 39/116 (34%)
HTH_MerR-SF <440..497 CDD:295384 14/56 (25%)
Ccdc50XP_011244304.1 CCDC50_N 4..128 CDD:373722 42/160 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850826
Domainoid 1 1.000 61 1.000 Domainoid score I10454
eggNOG 1 0.900 - - E1_2B49I
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005601
OrthoInspector 1 1.000 - - oto94961
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4987
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

Return to query results.
Submit another query.