DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10283 and ccdc50a

DIOPT Version :9

Sequence 1:NP_001163006.1 Gene:CG10283 / 35102 FlyBaseID:FBgn0032681 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001352926.1 Gene:ccdc50a / 566408 ZFINID:ZDB-GENE-150115-1 Length:581 Species:Danio rerio


Alignment Length:690 Identity:138/690 - (20%)
Similarity:236/690 - (34%) Gaps:232/690 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VNEVCKEWLVREDGALAYKLQSQEINDFYKGNRYRNAVVREDFPTA----LHEQIKEKEQAQRRV 83
            |.|||:::.:.||..||:.||.|||......|.|::.:.::|...|    ..|.::.|.::||: 
Zfish    14 VKEVCRDFALLEDHCLAHNLQEQEIESHLASNVYKSRLAQQDLQVAKRLQQEEDLRAKAESQRQ- 77

  Fly    84 DAYRRRLTEQEEHDKRVAKEIADKLERDLQEQQQKELMQSELIAKQMQE------------IYVN 136
               .||:   |..|..:|:||.|:|.|..::|:|:| .:.|.||:::.|            :..|
Zfish    78 ---HRRI---ERIDNEIAQEIQDQLVRQAEQQRQQE-EKDEAIARKLHEREMKEERKRQKQMETN 135

  Fly   137 LPPVPPPVTRDK-SRPP-----PRPAKASIHLQQQQQTQQTQSTQQQHQPEPSTSQQARYHSQLQ 195
               :......|| ||.|     |.|...|...::::.....|.......|.|...:....||  :
Zfish   136 ---IEEEFYEDKASRFPSDLREPNPHSTSSDYRKEKHRDYNQMISPYSSPNPDRKRYPNSHS--R 195

  Fly   196 QQQQQPLQLQQQHFSQTDNYVGLSLIPNIVDLPGATAACTTPSRNAQAHNQLLVSDVLPSPQQQQ 260
            ..:.:|::     ||::..       |.|          |...|...            ||.:|.
Zfish   196 YPEYEPVE-----FSRSKR-------PEI----------TNKGREYY------------SPDRQP 226

  Fly   261 QQHHSRFHHAQQPPQQQQHQSSSPARRARAPTNAITSATTNMPSTSSITQHPPTHTEHPADIDEL 325
            :....   |.::..|.....::.|.|:.:....      .|......:.:.|  |.::.||.|.:
Zfish   227 KISED---HLKERNQPLDLDNTEPRRKKKQDQG------DNFEPVVRLKEKP--HRDYSADRDRV 280

  Fly   326 VDY------------ADVADSIRDYNIAATSATATSASV----VDAAAT---------------- 358
            .|.            ....|..||.|...:.....|..|    :|.|..                
Zfish   281 WDKERNKDRERERDGQRTKDRQRDRNRTKSQDRLFSGDVRGRNMDRAMDQNIDGHRSRDRQRERG 345

  Fly   359 -----------------SLQKQRSPSHENL-----------------LRTEPKFQ---------- 379
                             ||...|..|.:||                 :..||.|:          
Zfish   346 RDGNRERHRSRERELDYSLSPSRGRSEDNLEWEDFSNRPRLPIGPNEVFEEPTFRGHSNDGQSPG 410

  Fly   380 KLSPEKYDQLVGNFGLGSVS-GLGSGSVSGSGSGSAKAAERHMQQHADDIELYVDPCDYASLREI 443
            ..|.|:..::.|.:|:...: ||..             .:.|.|:..|              .|:
Zfish   411 YSSRERGRKVRGEYGMKEATHGLAQ-------------LDLHDQEFRD--------------LEV 448

  Fly   444 GLPL--EEIQ--EISKKMKQEQKDELLARRLQAIESKDCVRQEHRDRLLAIEAQDKELAKMLQDR 504
            ...|  ||::  ::.|:..|..:||.:||||...|     ::|::      :::|||        
Zfish   449 ARKLQDEELKAVQVDKRAAQVAQDEEIARRLMEEE-----KREYK------KSKDKE-------- 494

  Fly   505 MNSKKLFSCRYNYLGFR--KEKAKAKRAKEKARLRKTQQKEAAEAANGNGNLLCGTNSHCGPLLP 567
               |::...|...|.::  :|.....|.:|:.|.|:.:.:.|              .:| .|..|
Zfish   495 ---KQVIERRRPELEYKPVQEDVVRPRTREEVRSREEEYQRA--------------RNH-KPARP 541

  Fly   568 LPPDCLSSNANQSQADIDVEAYSNPIDVLNSSREQRPHNG 607
            .||.....|.|.|.|.::     :|......||.:..:.|
Zfish   542 PPPTQHYENINPSYAYVE-----SPYSPRPPSRPEAAYKG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10283NP_001163006.1 RILP-like 14..132 CDD:304877 37/112 (33%)
HTH_MerR-SF <440..497 CDD:295384 16/60 (27%)
ccdc50aNP_001352926.1 CCDC50_N 7..127 CDD:317668 38/120 (32%)
RRM 271..>347 CDD:330708 12/75 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596857
Domainoid 1 1.000 70 1.000 Domainoid score I9493
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005601
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.030

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