DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10283 and ccdc50b

DIOPT Version :9

Sequence 1:NP_001163006.1 Gene:CG10283 / 35102 FlyBaseID:FBgn0032681 Length:746 Species:Drosophila melanogaster
Sequence 2:XP_690155.4 Gene:ccdc50b / 561649 ZFINID:ZDB-GENE-141215-69 Length:346 Species:Danio rerio


Alignment Length:336 Identity:93/336 - (27%)
Similarity:136/336 - (40%) Gaps:76/336 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KEALPRSGHVNEVCKEWLVREDGALAYKLQSQEINDFYKGNRYRNAVVREDFPTALHEQIKEKEQ 78
            |..||   .|.:||:.:.|.||||||..||.|||..||..|..:|..|:.|...|...|.:|:|:
Zfish     8 KSHLP---GVYDVCQCFSVLEDGALAQSLQEQEIEHFYSTNIQKNQTVQNDVRLARRLQEEEEER 69

  Fly    79 AQRRVDAYRRRLTEQEEHDKRVAKEIADKLERDLQEQQQKELMQSELIAKQMQEI---------- 133
            |         .|.:.||.|.|.|..|..:|:|..:|.:::| .|.|.||||:||.          
Zfish    70 A---------NLQQIEEEDCRYALMIQQQLQRCAEEARRQE-KQDEEIAKQLQEEEEMEMRRQRA 124

  Fly   134 ---YVNLPPVPPPVTRDKSRPPP------------RPAKASIHLQQQQQTQQTQSTQQQHQPEPS 183
               |           .|...|.|            :.|:.:..||::....|   ..|.|| .||
Zfish   125 ASGY-----------EDNDCPSPLCQGLGVWEQVLQDAELARRLQEEDMMPQ---RDQFHQ-RPS 174

  Fly   184 TSQQARYHSQLQQQQQQPLQLQQQHFSQTDNYVGLSL-IPNIVDLPGATAACTTPSRNAQAHNQL 247
            .|:.....:|:.|.::....:|::  .:..|:....| |.:..|..|.....||..:..|...:.
Zfish   175 GSEVDFIAAQVAQDEEIANYMQRR--QRRVNHKAQELEIQSRSDEEGRDEENTTTRKALQMLRER 237

  Fly   248 LVSDVLPSPQQQQQQHHSRFHHAQQPPQ------QQQH-----QSSSPARRARAPTNAITSATTN 301
            |.||.|.||.::..     |.....|..      :.||     :...|..:||...:.|||:   
Zfish   238 LNSDGLHSPAEEDD-----FTIQTLPASPSCTALKNQHIHNIAEELDPTFKARKRESQITSS--- 294

  Fly   302 MPSTSSITQHP 312
             |||:.:...|
Zfish   295 -PSTAGLCLAP 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10283NP_001163006.1 RILP-like 14..132 CDD:304877 46/117 (39%)
HTH_MerR-SF <440..497 CDD:295384
ccdc50bXP_690155.4 CCDC50_N 7..111 CDD:291941 45/115 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596858
Domainoid 1 1.000 70 1.000 Domainoid score I9493
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005601
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22115
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.030

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