DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10283 and ccdc50

DIOPT Version :9

Sequence 1:NP_001163006.1 Gene:CG10283 / 35102 FlyBaseID:FBgn0032681 Length:746 Species:Drosophila melanogaster
Sequence 2:NP_001167526.1 Gene:ccdc50 / 100380052 XenbaseID:XB-GENE-984492 Length:462 Species:Xenopus tropicalis


Alignment Length:629 Identity:131/629 - (20%)
Similarity:220/629 - (34%) Gaps:209/629 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VNEVCKEWLVREDGALAYKLQSQEINDFYKGNRYRNAVVREDFPTALHEQIKEKEQAQRRVDAYR 87
            |.|||:::.|.||.:||:.||.|||......|..||.:|:.|...|...|.:|..:||.::   :
 Frog    14 VKEVCRDFAVLEDHSLAHNLQEQEIEHHLATNIQRNRLVKTDLQVAKQLQEQEDLRAQTQI---K 75

  Fly    88 RRLTEQEEHDKRVAKEIADKLERDLQEQQQKELMQSELIAKQMQEIYVNLPPVPPPVTRDKSRPP 152
            .|.:|.|..|..:|:||.|:|..:.:.::|:| .:.|.||:.:||             |::.|  
 Frog    76 NRHSELEVLDSEIAQEIQDRLVIEAERRRQQE-EKDEDIARLLQE-------------REERR-- 124

  Fly   153 PRPAKASIHLQQQQQTQQTQSTQQQHQPEPSTSQQARYHSQLQQQQQQP---LQLQQQHFSQTDN 214
                                  :::|..|.....:...|.:...:..:|   .:|::.:|.:.|:
 Frog   125 ----------------------RKKHYQEDKEGHRKGRHKEYLSEYDRPHRHERLEKHNFERNDS 167

  Fly   215 YVGLSLIPN--IVDLPGATAACTTPSRNAQAHNQLLVSDVLPSPQQQQQQHHSRFHHAQQPPQQQ 277
            .:.   ||:  .|...|.:....:.::...::|.                 |....|...|..::
 Frog   168 ELE---IPSSKFVRQRGRSVESRSSNKEEDSYNV-----------------HKHGDHYDWPVSRK 212

  Fly   278 QHQSSSPARRARAPTNAITSATTNMPSTSSITQHPPTHTEHPADIDELVDYADVADSIRDYNIAA 342
            :.....|..|.....:...:..||          ...|.||            :....|.::...
 Frog   213 EKPQRPPPPRTSKHEDDFNTERTN----------GEYHNEH------------MHRKGRSHSQDL 255

  Fly   343 TSATATSASVVDAAATSLQKQRSPSHENLLRTEPKFQKLSPEKYDQLVGNFGLGSVSGLGSGSVS 407
            .||..:.|.         :|||..|.                                       
 Frog   256 LSAKNSDAD---------RKQRDNSD--------------------------------------- 272

  Fly   408 GSGSGSAKAAERHMQQHAD-DIE-----LYVDPCDYASLREIGLPLEEIQE--ISKK----MKQE 460
                     |:.|..:.:| |||     ....||...:||:.|...:..::  :||.    ..||
 Frog   273 ---------AKSHRSKESDFDIEKRRRRRTPSPCQERNLRDSGFRSKGARDAPVSKHTSGLRNQE 328

  Fly   461 QKDELLARRLQAIESKDCVRQEHRDRLLAIEAQDKELAKMLQDRMNSKKLFSCRYNYLGFRKEKA 525
            :.|..||||||..|    .|...:|:..|..|||:|:|:.|.|                  ||:.
 Frog   329 EHDAHLARRLQEKE----FRVNIKDKRAAQMAQDEEIARYLMD------------------KEEK 371

  Fly   526 KAKRAKEKARLRKTQQKEAAEAANGNGNLLCGTNSH------CGPLLPLPPDCLSSNANQSQADI 584
            ..|::|.:.::...::.|..||::.........:.|      ..|..||||.  ...|.....|.
 Frog   372 AYKKSKGREKMTDGKRPEELEASDHVRQRTREGHDHHHRSRSDKPYRPLPPP--PDTAEDDDYDD 434

  Fly   585 DVEAYSNPIDVLNSSREQRPHNGPLTNGSLTRDGGSGSNHSSMQ 628
            |   |:|    :|      |||.|.:         |..:.||::
 Frog   435 D---YTN----IN------PHNSPKS---------SSKSQSSLK 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10283NP_001163006.1 RILP-like 14..132 CDD:304877 38/108 (35%)
HTH_MerR-SF <440..497 CDD:295384 21/62 (34%)
ccdc50NP_001167526.1 CCDC50_N 7..127 CDD:291941 42/153 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9979
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005601
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4987
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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