DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bsf and AT1G79540

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_178072.1 Gene:AT1G79540 / 844292 AraportID:AT1G79540 Length:780 Species:Arabidopsis thaliana


Alignment Length:739 Identity:160/739 - (21%)
Similarity:278/739 - (37%) Gaps:171/739 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 DISHYNALLRVYLENEHGFAPTDFLA-----EIEAKGIEPNRVTYQRLIARYCQQGDIEGATRIL 198
            |:..||.:|||.:..|..|    .||     |:......||..|:..|:....::|....|.::.
plant   161 DVFTYNVILRVMMREEVFF----MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMF 221

  Fly   199 EFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAA 263
            :.|..:.:..|...:..||.|..|....:.|:.:...|..:|..|.:..:..||..|.:.|.:..
plant   222 DDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVE 286

  Fly   264 VKETLAECEQKEIILLDKDLLDIVYTLTVNGNGEHVDDVLTKLRLSPGFNQDAVNVILRLVNKGH 328
            ..|.|.        |.:||    .:.|.:.|....:|.:....|.:..|...| |::        
plant   287 AFELLR--------LFEKD----GFVLGLRGYSSLIDGLFRARRYTQAFELYA-NML-------- 330

  Fly   329 EDVGLKLLRVMPRSSRVNGEP-VDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIATE 392
                           :.|.:| :.:....|:.:.||.: :|..|.:..|:.|:|::|       :
plant   331 ---------------KKNIKPDIILYTILIQGLSKAGK-IEDALKLLSSMPSKGISP-------D 372

  Fly   393 AGLTNGVINNAL---PLLQEMKNAGLPIRQHYFWP-------LICSAESNQVLEIVRRMQQEFSV 447
            ....|.|| .||   .||:|.::..|.:.:...:|       ||||...|.::            
plant   373 TYCYNAVI-KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLV------------ 424

  Fly   448 FPNSETVRDYVIPNLKEKNWERIVTSLRDAGVPNSTAVTSAVYSALV-THQIAEAAKIMEKNRAY 511
                             :..|.|.|.:..:|...|.|..:|:...|. :.::.||..::.|....
plant   425 -----------------REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472

  Fly   512 YVPFLFKQPLILALSHTNDYASFIRCVRQIHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVVGA 576
            ....||     |.|||:.: .||   ...:..|...:..:|        :|.......:||:|..
plant   473 RPASLF-----LRLSHSGN-RSF---DTMVESGSILKAYRD--------LAHFADTGSSPDIVSY 520

  Fly   577 IVQEATTYFRR--DRGATLEKILKGLVKQGLSISSDKATQL---SEQLGSE-------------- 622
            .|  ....|.|  |....| |:|..|..:|||..|.....|   ..::|.|              
plant   521 NV--LINGFCRAGDIDGAL-KLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFR 582

  Fly   623 LTPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINELERFIVNVEGKGENANNIKRQLLNACFR 687
            .:|.:...|...|..:.:.:...|...:.|..:|..:           .|.||.|::     ||:
plant   583 HSPAVYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLD-----------DETANEIEQ-----CFK 631

  Fly   688 SQNLEKTLQVIEKLEAEKFQIPVGIYA-QLIDLNTHHKKSSEALEIYGKLKAKDATFQLDNLKAV 751
            ....|:.|:.:.:|:..|.::.:|.|. .||.| ....:..|||.::..|:.|  ...:.....|
plant   632 EGETERALRRLIELDTRKDELTLGPYTIWLIGL-CQSGRFHEALMVFSVLREK--KILVTPPSCV 693

  Fly   752 RLADLLLQEERVDAAFKI----LEENKKEVPVAEAEGSYNYMSTVWRILNSLAEAGQP-ERLRKL 811
            :|...|.:.|::|||.::    |:.|.|.:|..     .||      :|:||.|:.:. |.:.:|
plant   694 KLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRV-----CNY------LLSSLLESTEKMEIVSQL 747

  Fly   812 FDVLVGANYIVPTNVLLGPLIKVH 835
            .:.:..|.|.| .::|...::|.|
plant   748 TNRMERAGYNV-DSMLRFEILKYH 770

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 10/31 (32%)
PLN03218 <163..>261 CDD:215636 23/102 (23%)
PPR repeat 177..204 CDD:276811 5/26 (19%)
PPR repeat 210..239 CDD:276811 6/28 (21%)
PPR_2 213..257 CDD:463778 11/43 (26%)
PPR repeat 245..274 CDD:276811 6/28 (21%)
Pterin_binding <456..>543 CDD:444759 19/87 (22%)
LapB <661..855 CDD:442196 45/181 (25%)
PPR repeat 681..704 CDD:276811 5/22 (23%)
PPR repeat 710..739 CDD:276811 9/29 (31%)
PPR repeat 780..818 CDD:276811 8/38 (21%)
PPR repeat 825..854 CDD:276811 3/11 (27%)
AT1G79540NP_178072.1 PPR repeat 95..121 CDD:276811
PPR_3 115..171 CDD:316342 4/9 (44%)
PPR repeat 127..156 CDD:276811
PPR repeat 164..192 CDD:276811 10/31 (32%)
PLN03218 <181..>559 CDD:215636 98/471 (21%)
PPR repeat 200..227 CDD:276811 5/26 (19%)
PPR repeat 233..262 CDD:276811 6/28 (21%)
PPR repeat 268..292 CDD:276811 5/23 (22%)
PPR repeat 303..332 CDD:276811 6/52 (12%)
PPR repeat 340..367 CDD:276811 6/27 (22%)
PPR repeat 373..437 CDD:276811 18/93 (19%)
PLN03218 <421..>712 CDD:215636 74/358 (21%)
PPR repeat 443..470 CDD:276811 6/26 (23%)
PPR repeat 517..546 CDD:276811 9/31 (29%)
PPR repeat 586..614 CDD:276811 4/27 (15%)
PPR repeat 657..683 CDD:276811 8/26 (31%)
PPR repeat 689..718 CDD:276811 8/28 (29%)
PPR repeat 724..753 CDD:276811 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.