DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT1G63130

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_176501.1 Gene:AT1G63130 / 842617 AraportID:AT1G63130 Length:630 Species:Arabidopsis thaliana


Alignment Length:545 Identity:115/545 - (21%)
Similarity:196/545 - (35%) Gaps:131/545 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SILRTGKLLRYFAGFTRNVLVNSVREN----------ETSNLLNNAPCMCGQFQNGFATNAAAK- 56
            ||:...|||...|...:..||.|:.|.          .|.::|.|  |.|.:.|...|....|| 
plant    80 SIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN--CFCRRSQLSLALAVLAKM 142

  Fly    57 AELSLDKQI-------------RRLDQDVRRIGRISRRDLE-------EVLDEIRSHRTATSSQS 101
            .:|..:..|             .|:...|..:|::.....:       .::..:..|..|:.:.:
plant   143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207

  Fly   102 L---LVIRCCGNLVPEELPEVRT--------------ALVQEIWKTLNALNVPMDISHYNALLRV 149
            |   :|::.|       .|::.|              .|...:.|.:....:...:..||.::..
plant   208 LVDRMVVKGC-------QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265

  Fly   150 YLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFN 214
            ....::.....:...|::.|||.||.|||..||...|..|....|:|:|..|..:.:..|...|:
plant   266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330

  Fly   215 SLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILL 279
            :||....:...|..|:.:...|::..::|...||::|:..|..|       :.|.|.:....:::
plant   331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH-------DRLDEAKHMFELMI 388

  Fly   280 DKDLLD--IVYTLTVNG--NGEHVDD----------------VLTKLRLSPGFNQ----DAVNVI 320
            .||...  :.|...:.|  ..:.||:                .:|...|..||.|    |...::
plant   389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453

  Fly   321 LR--------------------LVNKGHEDVGLKLLRVMPRSSRVNGEPVDVGAF--FIRQMVKA 363
            .:                    |.|.|..:..|.:...:.||..   || |:..:  .|..|.||
plant   454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM---EP-DIYTYNIMIEGMCKA 514

  Fly   364 NRPVEKILSICKSLQSEGLNPKALTIAT--EAGLTNGVINNALPLLQEMKNAG-LP--------I 417
            .: ||....:..||..:|:.|..:|..|  ......|:...|..|.:|||..| ||        |
plant   515 GK-VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

  Fly   418 RQHYFWPLICSAESNQVLEIVRRMQ 442
            |.|     :...:.....|::|.|:
plant   579 RAH-----LRDGDKAASAELIREMR 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 3/26 (12%)
PLN03218 <163..>261 CDD:215636 30/97 (31%)
PPR repeat 177..204 CDD:276811 10/26 (38%)
PPR repeat 210..239 CDD:276811 6/28 (21%)
PPR_2 213..257 CDD:463778 11/43 (26%)
PPR repeat 245..274 CDD:276811 7/28 (25%)
Pterin_binding <456..>543 CDD:444759
LapB <661..855 CDD:442196
PPR repeat 681..704 CDD:276811
PPR repeat 710..739 CDD:276811
PPR repeat 780..818 CDD:276811
PPR repeat 825..854 CDD:276811
AT1G63130NP_176501.1 PPR_2 79..128 CDD:463778 14/49 (29%)
PPR repeat 84..110 CDD:276811 8/25 (32%)
PPR_2 115..163 CDD:463778 11/49 (22%)
PPR repeat 118..145 CDD:276811 9/28 (32%)
PPR repeat 153..180 CDD:276811 3/26 (12%)
PLN03218 <155..>591 CDD:215636 91/459 (20%)
PPR repeat 186..215 CDD:276811 4/28 (14%)
PPR repeat 221..249 CDD:276811 3/27 (11%)
PPR repeat 258..285 CDD:276811 3/26 (12%)
PPR repeat 293..320 CDD:276811 10/26 (38%)
PPR repeat 328..355 CDD:276811 6/26 (23%)
PPR repeat 361..390 CDD:276811 7/35 (20%)
PPR repeat 396..425 CDD:276811 4/28 (14%)
PPR repeat 431..460 CDD:276811 6/28 (21%)
PPR repeat 468..495 CDD:276811 4/26 (15%)
PPR repeat 501..530 CDD:276811 8/29 (28%)
PPR repeat 536..565 CDD:276811 8/28 (29%)
PPR repeat 571..599 CDD:276811 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.

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