Protein Alignment bsf and AT1G52620

DIOPT Version :10

• Sequence 1: NP_523596.2
• Gene: bsf / 35100
• FlyBaseID: FBgn0284256
• Length: 1412
• Species: Drosophila melanogaster
• Sequence 2: NP_175671.1
• Gene: AT1G52620 / 841694
• AraportID: AT1G52620
• Length: 819
• Species: Arabidopsis thaliana
• Alignment Length: 542
• Identity: 118/542 - (21%)
• Similarity: 193/542 - (35%)
• Gaps: 179/542 - (33%)

  Fly    73 RRIGRISRRDLEEVLDEI--RSHRTATSSQSLLVIRCCGNLVPEELPEVRTALVQEIWKTLNALN 135
            ||:|     |..:|.||:  |.......|..:||...|.    |...||...|::..|   ....
plant   184 RRLG-----DARKVYDEMCDRGDSVDNYSTCILVKGMCN----EGKVEVGRKLIEGRW---GKGC 236

  Fly   136 VPMDISHYNALLRVY-----LENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGAT 195
            :| :|..||.::..|     :||.:     ....|::.||..|...|:..:|..:|::||...:.
plant   237 IP-NIVFYNTIIGGYCKLGDIENAY-----LVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295

  Fly   196 RILEFMRAKSLPVNENVFNSLI---------------LGHSQANDL------------------- 226
            |:|..::.:.|.|:....|::|               :|...|||.
plant   296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360

  Fly   227 -ESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILLDKDLL------ 284
             |.|.|.|....:.||.|:..:|..|:.|:               |:.||..:..|.||
plant   361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAY---------------CKSKEYDIASKLLLQMAERG 410

  Fly   285 ---DIV-YTLTVNG---NGEHVDDVLTKLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRS 342
               ||| |.:.::|   :| |:|              ||||:.::|:::|          |.|.:
plant   411 CKPDIVTYGILIHGLVVSG-HMD--------------DAVNMKVKLIDRG----------VSPDA 450

  Fly   343 SRVNGEPVDVGAFFIRQMVKANR--PVEKILSICKSLQSEGLNPKALTIAT--EAGLTNGVINNA 403
            :..|        ..:..:.|..|  |.:.:.|   .:....:.|.|...||  :..:.:|..:.|
plant   451 AIYN--------MLMSGLCKTGRFLPAKLLFS---EMLDRNILPDAYVYATLIDGFIRSGDFDEA 504

  Fly   404 LPLLQEMKNAGLPIRQHYFWPLI---C-SAESNQVLEIVRRMQQEFSV---FPNSETVRDYV--- 458
            ..:.......|:.:...:...:|   | |...::.|..:.||.:|..|   |..|..:..||
plant   505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQ 569

  Fly   459 -------IPNLKEKN--WERIVT------------------------SLRDAGVPNSTAVTSAVY 490
                   |....|||  ...:||                        .|||. |||....|:.:.
plant   570 DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL-VPNVVTYTTLIR 633

  Fly   491 SALVTHQIAEAAKIMEKNRAYY 512
            |      :|:.:..:|| ..||
plant   634 S------LAKESSTLEK-AVYY 648

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsf	NP_523596.2	PPR repeat	142..169	CDD:276811	6/31 (19%)
		PLN03218	<163..>261	CDD:215636	29/132 (22%)
		PPR repeat	177..204	CDD:276811	7/26 (27%)
		PPR repeat	210..239	CDD:276811	10/63 (16%)
		PPR_2	213..257	CDD:463778	16/78 (21%)
		PPR repeat	245..274	CDD:276811	4/28 (14%)
		Pterin_binding	<456..>543	CDD:444759	21/93 (23%)
		LapB	<661..855	CDD:442196
		PPR repeat	681..704	CDD:276811
		PPR repeat	710..739	CDD:276811
		PPR repeat	780..818	CDD:276811
		PPR repeat	825..854	CDD:276811
AT1G52620	NP_175671.1	PPR repeat	452..479	CDD:276811	5/37 (14%)
		PPR repeat	487..514	CDD:276811	4/26 (15%)
		PPR repeat	522..549	CDD:276811	6/26 (23%)
		PPR repeat	555..584	CDD:276811	6/28 (21%)
		PPR repeat	590..619	CDD:276811	2/28 (7%)
		PPR repeat	625..655	CDD:276811	7/31 (23%)
		PPR_2	712..756	CDD:463778
		PPR repeat	101..128	CDD:276811
		PLN03218	<123..>422	CDD:215636	63/270 (23%)
		PPR repeat	136..163	CDD:276811
		PPR repeat	170..198	CDD:276811	7/18 (39%)
		PPR repeat	210..234	CDD:276811	8/30 (27%)
		PPR_2	238..287	CDD:463778	13/54 (24%)
		PPR repeat	242..269	CDD:276811	6/31 (19%)
		PPR repeat	275..304	CDD:276811	7/28 (25%)
		PLN03218	<343..>668	CDD:215636	75/365 (21%)
		PPR repeat	347..374	CDD:276811	4/26 (15%)
		PPR repeat	382..409	CDD:276811	9/41 (22%)
		PPR repeat	417..444	CDD:276811	10/41 (24%)