Protein Alignment bsf and AT1G22960

DIOPT Version :10

• Sequence 1: NP_523596.2
• Gene: bsf / 35100
• FlyBaseID: FBgn0284256
• Length: 1412
• Species: Drosophila melanogaster
• Sequence 2: NP_001319064.1
• Gene: AT1G22960 / 838903
• AraportID: AT1G22960
• Length: 718
• Species: Arabidopsis thaliana
• Alignment Length: 610
• Identity: 128/610 - (20%)
• Similarity: 209/610 - (34%)
• Gaps: 152/610 - (24%)

  Fly    46 QNGFATNAAAKAELSLDKQIRRLDQDVRRIGRISRRDLEEVLDEIRSHRTATSSQSLLVIRCCGN 110
            :|...:.|...||.|:|..:..:| |:...|...:....::||.:....|..|.....::.....
plant   131 ENDLMSEAYLVAERSIDLGMHEID-DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKM 194

  Fly   111 LVPEELPEVRTA-LVQEIWKTLNALNVPMDISHYNALLRVYLENEHGFAPT-------------- 160
            :....||.||.. :|.::.:....:|....:  |..::      |||..||
plant   195 IRKGFLPSVRNCNIVLKVLRDSRMMNKASAV--YETMI------EHGIMPTVITFNTMLDSCFKA 251

  Fly   161 -------DFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLIL 218
                   ....|::.:.||.:.|||..||..:.:.|.:|.|.|....||.....|....||.||.
plant   252 GDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316

  Fly   219 GHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEII------ 277
            |:.:....:.|.|:...|:.||:.|:..||...:||....|.:...:|.|:.....:::
plant   317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLM 381

  Fly   278 -------------LLDKDLLD-------IVYTLTVNGNGEH------------------VDDVLT 304
                         ||..||..       :.|...::|..|.                  ..||:|
plant   382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446

  Fly   305 KLRLSPGFNQD-----AVNVILRLVNKGHED---------VGLKLLRVMPRSSRVNGEPV----- 350
            ...|..||.::     |..|...::.||.:.         ||...|....::.|::.|.|
plant   447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511

  Fly   351 --DVGAFFIR--------QMVKANRPVEKILSICKSLQSEGLNPKALTIAT--EAGLTNGVINNA 403
              |:..:.:|        .:|||.....||..:       ||.|..:|..|  ...|.||....|
plant   512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV-------GLVPDHVTYTTVIRGYLENGQFKMA 569

  Fly   404 LPLLQEMKNAGL-PIRQHYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW 467
            ..|..||....| |....||..:...|::.       |::|.|
plant   570 RNLYDEMLRKRLYPSVITYFVLIYGHAKAG-------RLEQAF---------------------- 605

  Fly   468 ERIVTSLRDAGV-PNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDY 531
             :..|.::..|| ||.....:.:|.......|.||.:.:.|.....:| ..|....:.:|...|:
plant   606 -QYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIP-PNKYSYTMLISKNCDF 668

  Fly   532 ASFIRCVRQIHEGLQFRQGKDEEVE 556
            ..:...|:...|.|      |:|:|
plant   669 EKWEEVVKLYKEML------DKEIE 687

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bsf	NP_523596.2	PPR repeat	142..169	CDD:276811	7/47 (15%)
		PLN03218	<163..>261	CDD:215636	31/97 (32%)
		PPR repeat	177..204	CDD:276811	10/26 (38%)
		PPR repeat	210..239	CDD:276811	8/28 (29%)
		PPR_2	213..257	CDD:463778	15/43 (35%)
		PPR repeat	245..274	CDD:276811	7/28 (25%)
		Pterin_binding	<456..>543	CDD:444759	15/87 (17%)
		LapB	<661..855	CDD:442196
		PPR repeat	681..704	CDD:276811
		PPR repeat	710..739	CDD:276811
		PPR repeat	780..818	CDD:276811
		PPR repeat	825..854	CDD:276811
AT1G22960	NP_001319064.1	PPR_2	201..250	CDD:463778	11/56 (20%)
		PPR repeat	205..232	CDD:276811	3/34 (9%)
		PPR repeat	240..267	CDD:276811	1/26 (4%)
		PLN03218	<252..>654	CDD:215636	94/439 (21%)
		PPR repeat	275..302	CDD:276811	10/26 (38%)
		PPR repeat	308..337	CDD:276811	8/28 (29%)
		PPR repeat	343..369	CDD:276811	7/25 (28%)
		PPR repeat	376..403	CDD:276811	4/26 (15%)
		PPR repeat	409..438	CDD:276811	3/28 (11%)
		PPR repeat	444..473	CDD:276811	7/28 (25%)
		PPR repeat	479..506	CDD:276811	5/26 (19%)
		PPR repeat	517..544	CDD:276811	6/26 (23%)
		PPR repeat	552..579	CDD:276811	9/26 (35%)
		PPR repeat	585..614	CDD:276811	7/58 (12%)
		PPR repeat	620..649	CDD:276811	5/28 (18%)
		PPR_2	653..700	CDD:463778	9/41 (22%)
		PPR repeat	655..684	CDD:276811	6/34 (18%)