DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT1G19290

DIOPT Version :9

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001319043.1 Gene:AT1G19290 / 838511 AraportID:AT1G19290 Length:904 Species:Arabidopsis thaliana


Alignment Length:694 Identity:134/694 - (19%)
Similarity:270/694 - (38%) Gaps:205/694 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 KTLNALNVPMDISHYNALLRVY--LENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDI 191
            :|.::|.:.:::..||:|:..|  :.:..|.  |..|..:..:|:..|.|||..||..||::|.:
plant   250 ETESSLGLELNVVTYNSLINGYAMIGDVEGM--TRVLRLMSERGVSRNVVTYTSLIKGYCKKGLM 312

  Fly   192 EGATRILEFMRAKSLPVNENVF-----------------------------------NSLILGHS 221
            |.|..:.|.::.|.|..:::::                                   ||||.|:.
plant   313 EEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377

  Fly   222 QANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILLDKDLLDI 286
            ::..|..|:.|...|....|:|...||.||:..:.|.|   .|.|.|..|:|    :..|:::..
plant   378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG---YVDEALKLCDQ----MCQKEVVPT 435

  Fly   287 VYTLTVNGNGEH----VDDVLT--KLRLSPGFNQDAVN---VILRLVNKGHEDVGLKL------- 335
            |.|..:...|..    ..|||:  |:.|..|.|.|.::   ::..|...|..:..:||       
plant   436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500

  Fly   336 --------LRVM----PRSSRVN--GEPVD-----------------------VG----AFFIRQ 359
                    |.||    .:..:||  .|.:|                       ||    ||.:::
plant   501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565

  Fly   360 MVKAN-------------------RPVEKILSICKSLQSEGLNPKALTIATEAGLTN-----GVI 400
            .::..                   |.:.|:..:...|::.||.|   |:||...|..     |:|
plant   566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTP---TVATYGALITGWCNIGMI 627

  Fly   401 NNALPLLQEMKNAGLPIRQHYFWPLICSAESNQVLE---------IVRRMQQEFSVFPNSETVRD 456
            :.|.....||...|:.:..:     |||..:|.:..         :::::.....:.|..:::::
plant   628 DKAYATCFEMIEKGITLNVN-----ICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKE 687

  Fly   457 YVIPN----LKEKNWERIVTSLRDAG-----VPNSTAVTSAVYSALVTHQIAEAAK----IMEKN 508
            ::..:    ||.   ::|..|:.::.     |||:.....|:.......::.:|.|    ::..:
plant   688 FLEASATTCLKT---QKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749

  Fly   509 RAYYVPFLFKQPLIL---ALSHTNDYASFIR-------------CVRQIHEGLQFRQGKDEEVEQ 557
            |  ::|..:...:::   |::...:.|..:|             ....:.:|| .:.|..:..::
plant   750 R--FIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL-CKLGNVDRAQR 811

  Fly   558 VEGVAAVPTERITPDVVGAIVQEATTYFRRDRGATLEKILKGLVKQGLSISSDKATQLSEQLGSE 622
            :  :..:|.:.|||:.:                 |...::.||||.|   :..:|.:|.|::..:
plant   812 L--LHKLPQKGITPNAI-----------------TYNTLIDGLVKSG---NVAEAMRLKEKMIEK 854

  Fly   623 LTPKISELLGKLSSGE---LEP-VPLPNSGKRSLDSLSINELER 662
            ...:.|:..|.:...:   |:| |.|.::|...::|..:.::.|
plant   855 GLVRGSDKQGDVDIPKEVVLDPEVKLGSTGVIEMNSNELYDVRR 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR_2 139..187 CDD:289786 15/49 (31%)
PPR repeat 142..169 CDD:276811 7/28 (25%)
PPR_1 169..202 CDD:289614 13/32 (41%)
PPR_2 173..222 CDD:289786 19/83 (23%)
PPR repeat 177..204 CDD:276811 10/26 (38%)
PPR repeat 210..239 CDD:276811 9/63 (14%)
PPR_2 213..257 CDD:289786 15/78 (19%)
PPR repeat 245..274 CDD:276811 10/28 (36%)
Pterin_binding <456..>543 CDD:294150 15/115 (13%)
PPR repeat 681..704 CDD:276811
PPR repeat 710..739 CDD:276811
PPR repeat 780..818 CDD:276811
PPR repeat 825..854 CDD:276811
AT1G19290NP_001319043.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 109 1.000 Inparanoid score I2075
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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