DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT1G06710

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_172156.2 Gene:AT1G06710 / 837181 AraportID:AT1G06710 Length:997 Species:Arabidopsis thaliana


Alignment Length:1052 Identity:209/1052 - (19%)
Similarity:366/1052 - (34%) Gaps:301/1052 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 QNGFATNAAAKAELSLDKQIRRLDQDVRRIGR--ISRRDLEEVL-----------------DEIR 91
            |:.....|.|.|...:|....|..|...|..|  :|...:.|||                 .:|.
plant    96 QSSIDARAIADAVSGVDDVFGRKSQKFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIG 160

  Fly    92 SHRTATSSQSL--LVIRCCGNLVPEE-LPEVRTALVQEIWKTLNAL------NVPMDI------- 140
            ...||....:|  |::|.....|||| |.::|....:...:.||.|      |....|       
plant   161 YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGR 225

  Fly   141 ----------SHYNALLRVYLENEH-------------------GFAPTDF-------------L 163
                      |.||.|::.:|:.:.                   ||....|             |
plant   226 LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREAL 290

  Fly   164 AEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLES 228
            ..:|.:...|:.|.|.:||:..|:....|.|...|..|||.|...|...:::|:.|......|..
plant   291 TLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355

  Fly   229 AKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAECEQKEIILLDKDLLDIVYTLTVN 293
            .|.:|.:||..|..||...:.:|:.|:...||.:...:.|     |:::........:||.:.: 
plant   356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL-----KKMVKCGHMPGYVVYNILI- 414

  Fly   294 GNGEHVDDVLTKLRLSPGFNQDAVNV-ILRLVNKGHEDV---GLKLLRVMPRSSRVNGEPVDVGA 354
              |....|            :|::|. :|.|..|.:.::   |:.|.::...|            
plant   415 --GSICGD------------KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSS------------ 453

  Fly   355 FFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIATEAGLTNGVINN-----ALPLLQEMKNAG 414
             |.|.:..|.: .||..|:.:.:..:|..|..   :|.:.:.|.:.|.     |..|.:|||..|
plant   454 -FTRCLCSAGK-YEKAFSVIREMIGQGFIPDT---STYSKVLNYLCNASKMELAFLLFEEMKRGG 513

  Fly   415 LPIRQHYFWPLICSAESNQVLEIVRRM---QQEFSVFPNSETVRDYVIPNLKEKNW----ERIVT 472
            |....:.:..::.|.....::|..|:.   .:|....||..|....:...||.|..    |...|
plant   514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578

  Fly   473 SLRDAGVPNSTAVTSAVYSALV-----THQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYA 532
            .|.:..:||  .||   ||||:     ..|:.:|.:|.|:                 :..:.|..
plant   579 MLSEGCLPN--IVT---YSALIDGHCKAGQVEKACQIFER-----------------MCGSKDVP 621

  Fly   533 SFIRCVRQIHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGATLEKIL 597
            ..         .:.|:|..|.            :||  |:||        ||     ||.|:...
plant   622 DV---------DMYFKQYDDN------------SER--PNVV--------TY-----GALLDGFC 650

  Fly   598 KGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPLPNSGKRSLDSLSINELER 662
            |                      |....:..:||..:|....||                |::  
plant   651 K----------------------SHRVEEARKLLDAMSMEGCEP----------------NQI-- 675

  Fly   663 FIVNVEGKGENANNIKRQLLNACFRSQNLEKTLQVIEKLEAEKFQIPVGIYAQLIDLNTHHKKSS 727
                          :...|::...:...|::..:|..::....|...:..|:.|||.....|:..
plant   676 --------------VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726

  Fly   728 EALEIYGKLKAKDATFQLDNLKAVRLADLLLQEERVDAAFKI--LEENKKEVPVAEAEGSYNYMS 790
            .|.::..|:        |:|..|   .::::..|.:|...|:  .:|..|.:.:.|.:|....:.
plant   727 LASKVLSKM--------LENSCA---PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVV 780

  Fly   791 TVWRILNSLAEAGQPERLRKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKY 855
            |...:::.....|:.|...:|.: .:|:..:.|..|....||. |..|:.   |::....:.::.
plant   781 TYTAMIDGFGMIGKIETCLELLE-RMGSKGVAPNYVTYRVLID-HCCKNG---ALDVAHNLLEEM 840

  Fly   856 KSTPWKNELA--CRLIQ---KEDAANLQKLTDLSTGIHGEVNSLYDLVF-SFVECGRVRQARKIL 914
            |.|.|....|  .::|:   ||...:|..|.::.........|:|.|:. :.::..|:..|.::|
plant   841 KQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905

  Fly   915 ETPGLRTRPQRINSACDRYKNEGLLQPLEGLIEATKDLGHIDRNKIYYTLLLSYDKADEAEKALG 979
            |.                              .||.....:|.:..|.:|:.|...|::.|.|..
plant   906 EE------------------------------VATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940

  Fly   980 LWTKMQEENVTP 991
            |:::|.::.|.|
plant   941 LFSEMTKKGVIP 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 9/58 (16%)
PLN03218 <163..>261 CDD:215636 29/97 (30%)
PPR repeat 177..204 CDD:276811 9/26 (35%)
PPR repeat 210..239 CDD:276811 7/28 (25%)
PPR_2 213..257 CDD:463778 12/43 (28%)
PPR repeat 245..274 CDD:276811 5/28 (18%)
Pterin_binding <456..>543 CDD:444759 19/95 (20%)
LapB <661..855 CDD:442196 33/195 (17%)
PPR repeat 681..704 CDD:276811 3/22 (14%)
PPR repeat 710..739 CDD:276811 7/28 (25%)
PPR repeat 780..818 CDD:276811 6/37 (16%)
PPR repeat 825..854 CDD:276811 6/28 (21%)
AT1G06710NP_172156.2 PPR repeat 167..194 CDD:276811 9/26 (35%)
PLN03218 <204..>608 CDD:215636 96/445 (22%)
PPR repeat 204..229 CDD:276811 4/24 (17%)
PPR repeat 235..261 CDD:276811 5/25 (20%)
PPR repeat 304..331 CDD:276811 9/26 (35%)
PPR repeat 337..366 CDD:276811 7/28 (25%)
PPR repeat 372..400 CDD:276811 6/32 (19%)
PPR repeat 485..512 CDD:276811 8/26 (31%)
PLN03218 <520..>911 CDD:215636 97/548 (18%)
PPR repeat 520..547 CDD:276811 3/26 (12%)
PPR repeat 553..582 CDD:276811 7/28 (25%)
PPR repeat 588..614 CDD:276811 10/45 (22%)
PPR repeat 639..665 CDD:276811 11/60 (18%)
PPR repeat 674..702 CDD:276811 3/43 (7%)
PPR repeat 711..738 CDD:276811 8/34 (24%)
PPR repeat 746..773 CDD:276811 6/26 (23%)
PPR repeat 779..808 CDD:276811 5/29 (17%)
PPR repeat 814..842 CDD:276811 6/31 (19%)
PPR repeat 884..909 CDD:276811 6/54 (11%)
PPR repeat 915..948 CDD:276811 9/32 (28%)
PPR_2 921..966 CDD:463778 10/32 (31%)
PPR repeat 954..978 CDD:276811
Blue background indicates that the domain is not in the aligned region.

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