DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT1G05670

DIOPT Version :9

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001154307.2 Gene:AT1G05670 / 837074 AraportID:AT1G05670 Length:741 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR_2 139..187 CDD:289786
PPR repeat 142..169 CDD:276811
PPR_1 169..202 CDD:289614
PPR_2 173..222 CDD:289786
PPR repeat 177..204 CDD:276811
PPR repeat 210..239 CDD:276811
PPR_2 213..257 CDD:289786
PPR repeat 245..274 CDD:276811
Pterin_binding <456..>543 CDD:294150
PPR repeat 681..704 CDD:276811
PPR repeat 710..739 CDD:276811
PPR repeat 780..818 CDD:276811
PPR repeat 825..854 CDD:276811
AT1G05670NP_001154307.2 PLN03218 <173..>617 CDD:215636
PPR repeat 212..240 CDD:276811
PPR repeat 248..275 CDD:276811
PPR repeat 283..310 CDD:276811
PPR repeat 316..345 CDD:276811
PPR repeat 353..380 CDD:276811
PPR repeat 388..415 CDD:276811
PPR repeat 421..450 CDD:276811
PPR repeat 458..485 CDD:276811
PPR repeat 491..520 CDD:276811
PPR repeat 526..555 CDD:276811
PPR repeat 561..590 CDD:276811
PPR repeat 596..625 CDD:276811
PPR_2 629..678 CDD:404055
PPR repeat 631..660 CDD:276811
PPR repeat 666..695 CDD:276811
PPR 668..700 CDD:273253
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm3507
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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