DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT5G62370

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_201043.1 Gene:AT5G62370 / 836358 AraportID:AT5G62370 Length:982 Species:Arabidopsis thaliana


Alignment Length:948 Identity:199/948 - (20%)
Similarity:366/948 - (38%) Gaps:235/948 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QIRRLDQDVRRIGRI-------SRRDLEEVLDEIRSHRTATSSQSLLVIRCCGNLVPEELPEVRT 121
            ::||.|:....:.||       ||.....|:||:     ....:.|....|.     |::.|..:
plant   143 KLRRFDEARAHLDRIIASGYAPSRNSSSLVVDEL-----CNQDRFLEAFHCF-----EQVKERGS 197

  Fly   122 AL----VQEIWKTL---NALN--------------VPMDISHYNALLRVYLENEHGFAPTDFLAE 165
            .|    .:.::|.|   ..||              :|:.::.|.:|...:.:.............
plant   198 GLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDH 262

  Fly   166 IEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAK 230
            :|..|...::|.|..|:..||:..::..|.|:...|..:|..::..:||:||.|..:...|:..:
plant   263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGR 327

  Fly   231 GILGVMMQAGLEPSADTYTTLLCAFARHGDL-----AAVKETLAECEQKEIILLDKDLLDIVYTL 290
            .:...|::.|::.:..||..::.::.:.|::     ..|..|.:|...:.:    ....::::..
plant   328 VMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNV----HCYTNLIFGF 388

  Fly   291 TVNGNGEHVDDVLTKLRLSPGFNQDAVN--VILRLVNKGHEDVGLKLLRVMPRSSRVNG----EP 349
            ...|..:...|:|.:: |..|...|.:.  |:|:::.|.||   ||...|:.:|...||    .|
plant   389 YKKGGMDKAVDLLMRM-LDNGIVPDHITYFVLLKMLPKCHE---LKYAMVILQSILDNGCGINPP 449

  Fly   350 V--DVGAFFIRQMVKANRPVEKIL-SICKSLQSEGLNPKALTIATEAGLTNGVINNALPLLQEMK 411
            |  |:|...::        ||.:| .|.:  :...|....|.:.|.|..:......||..:::|.
plant   450 VIDDLGNIEVK--------VESLLGEIAR--KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMV 504

  Fly   412 NAG-LPIRQHYFWPLICSAESNQVLEIVRRMQ--QEFSVFPNSETVRDYVIPNLKEKNWER---- 469
            |.| .|:...|...:.|..:.|.:.::...:.  ||....|:.:|.. .|:..|.:|| :|    
plant   505 NLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYL-IVVNELCKKN-DRDAAF 567

  Fly   470 -IVTSLRDAGVPNSTAVTSAVYSALVTH-QIAEA----AKIMEKNRAYYVPFLFKQPLILA-LSH 527
             |:.::.:.|:..:.|:.|::..:|... ::.||    ||::|..         .||..:| :..
plant   568 AIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESG---------IQPDEIAYMIM 623

  Fly   528 TNDYASFIRCVRQIHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGAT 592
            .|.||               |.|:.:|..:                   :|:|...:|.|....|
plant   624 INTYA---------------RNGRIDEANE-------------------LVEEVVKHFLRPSSFT 654

  Fly   593 LEKILKGLVKQGLSISSDKATQ-LSEQLGSELTPKI---SELLGK-LSSGELEPVPLPNSGKRSL 652
            ...::.|.||.|:   .:|..| |.:.|...|:|.:   :.|:|. |..|:.             
plant   655 YTVLISGFVKMGM---MEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF------------- 703

  Fly   653 DSLSINELERFIVNVEG-KGENANNIKRQ------LLNACFRSQNLEKTLQVIEKLEAEKF---- 706
                     :|...:.| .||  |:||..      ||:..:|:...:|..|||.:...||.    
plant   704 ---------KFSFTLFGLMGE--NDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL 757

  Fly   707 -------QIP--VGIYAQLIDLNTHHKKSSEALEIYGKLKAKDATFQLDNLKAVRLADLLLQEE- 761
                   .||  :|.|.          ..|.|:|:.||:|           |:: :.:|.|... 
plant   758 IRTKPLVSIPSSLGNYG----------SKSFAMEVIGKVK-----------KSI-IPNLYLHNTI 800

  Fly   762 --------RVDAAFKILEENKKEVPVAEAEGSYNYMSTVWRILNSLAEAGQPERLRKLFDVLVGA 818
                    |:|.|:..||..:|       ||....:.|...::.|..|||..|....||:   |.
plant   801 ITGYCAAGRLDEAYNHLESMQK-------EGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GT 855

  Fly   819 NYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKS--TPWKNE----LACRLIQKEDAANL 877
            | ..|..|:...|:|...   |..:.::|...:.:..||  .|.|:.    |.|....:.....:
plant   856 N-CEPDQVMYSTLLKGLC---DFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAV 916

  Fly   878 QKLTDLST-GI-HGEVNSLYDLVFSFVECGRVRQARKI 913
            :.:.|::. .| ...:|..: |::...|..::|:||.:
plant   917 KVVKDMAALDIWPRSINHTW-LIYILCEEKKLREARAL 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 3/26 (12%)
PLN03218 <163..>261 CDD:215636 22/97 (23%)
PPR repeat 177..204 CDD:276811 7/26 (27%)
PPR repeat 210..239 CDD:276811 7/28 (25%)
PPR_2 213..257 CDD:463778 10/43 (23%)
PPR repeat 245..274 CDD:276811 6/33 (18%)
Pterin_binding <456..>543 CDD:444759 21/97 (22%)
LapB <661..855 CDD:442196 53/222 (24%)
PPR repeat 681..704 CDD:276811 7/22 (32%)
PPR repeat 710..739 CDD:276811 8/28 (29%)
PPR repeat 780..818 CDD:276811 10/37 (27%)
PPR repeat 825..854 CDD:276811 5/28 (18%)
AT5G62370NP_201043.1 PPR repeat 829..855 CDD:276811 8/28 (29%)
PPR_2 859..907 CDD:463778 12/50 (24%)
PPR repeat 861..890 CDD:276811 5/31 (16%)
PPR repeat 896..922 CDD:276811 3/25 (12%)
PPR repeat 931..960 CDD:276811 6/24 (25%)
PPR repeat 46..89 CDD:276811
PLN03081 93..>420 CDD:215563 54/291 (19%)
PPR repeat 97..125 CDD:276811
PPR repeat 131..160 CDD:276811 5/16 (31%)
PPR repeat 166..195 CDD:276811 7/38 (18%)
PPR repeat 240..266 CDD:276811 3/25 (12%)
PPR repeat 274..301 CDD:276811 7/26 (27%)
PPR repeat 307..336 CDD:276811 7/28 (25%)
PPR repeat 378..407 CDD:276811 4/33 (12%)
PPR repeat 413..442 CDD:276811 9/31 (29%)
PPR_2 513..559 CDD:463778 9/46 (20%)
PPR repeat 514..541 CDD:276811 4/26 (15%)
PLN03218 <537..>872 CDD:215636 98/439 (22%)
PPR repeat 549..576 CDD:276811 7/28 (25%)
PPR repeat 584..611 CDD:276811 6/26 (23%)
PPR repeat 617..646 CDD:276811 9/62 (15%)
PPR repeat 652..681 CDD:276811 9/31 (29%)
PPR repeat 687..716 CDD:276811 8/52 (15%)
PPR repeat 798..823 CDD:276811 6/31 (19%)
Blue background indicates that the domain is not in the aligned region.

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