DRSC/TRiP Functional Genomics Resources

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Protein Alignment bsf and AT5G59900

DIOPT Version :10

Sequence 1:NP_523596.2 Gene:bsf / 35100 FlyBaseID:FBgn0284256 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_200798.1 Gene:AT5G59900 / 836112 AraportID:AT5G59900 Length:907 Species:Arabidopsis thaliana


Alignment Length:651 Identity:136/651 - (20%)
Similarity:243/651 - (37%) Gaps:188/651 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EVLDEIRSHRTATSSQSLLVIRCCGNLVP--EELPEVRTALVQEIWKTLNALNVPMDISHYNALL 147
            |::||:...|.:.|..::      .:||.  .:..::..||  .:.|.:....|..::..||||:
plant   318 EMMDEMLCLRFSPSEAAV------SSLVEGLRKRGKIEEAL--NLVKRVVDFGVSPNLFVYNALI 374

  Fly   148 ------RVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSL 206
                  |.:.|.|..|   |.:.:|   |:.||.|||..||..:|::|.::.|...|..|....|
plant   375 DSLCKGRKFHEAELLF---DRMGKI---GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433

  Fly   207 PVNENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADTYTTLLCAFARHGDLAAVKETLAEC 271
            .::...:||||.||.:..|:.:|:|.:..|:...|||:..|||:|:..:...|.:........| 
plant   434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE- 497

  Fly   272 EQKEIILLDKDLLDIVYTLTVNGNGEHVDDVLTKLRLSPGFNQDAV------------------N 318
                  :..|.:...:||.|.         :|:.| ...|..:|||                  |
plant   498 ------MTGKGIAPSIYTFTT---------LLSGL-FRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546

  Fly   319 VILR-LVNKGHEDVGLKLLRVMPRSSRV---------------NGEPVDVGAFFIRQMVKAN--- 364
            |::. ...:|......:.|:.|.....|               .|:..: ...|:..:.|.|   
plant   547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE-AKVFVDGLHKGNCEL 610

  Fly   365 ---------------RPVEKILSICKSLQSEGLNPKALTIATEAGLTNGVINNA-----LPLLQE 409
                           ..:|:.||:|:.:...|::   |.:.....|.:|.:.:.     ..||:|
plant   611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD---LDLVCYGVLIDGSLKHKDRKLFFGLLKE 672

  Fly   410 MKNAGLPIRQHYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNWERIVTSL 474
            |.:.||......:..:| .|:|.     ....::.|.::  ...:.:..:||  |..:..::..|
plant   673 MHDRGLKPDDVIYTSMI-DAKSK-----TGDFKEAFGIW--DLMINEGCVPN--EVTYTAVINGL 727

  Fly   475 RDAG-----------------VPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYVPFLFKQPLI 522
            ..||                 |||.  ||...:..::|....:..|.:|.:.|           |
plant   728 CKAGFVNEAEVLCSKMQPVSSVPNQ--VTYGCFLDILTKGEVDMQKAVELHNA-----------I 779

  Fly   523 L--ALSHTNDYASFIR--CVRQIHEGLQFRQGKDEEVEQVEGVAAVPTERITPDVVGAIVQEATT 583
            |  .|::|..|...||  |          |||:.||..::  :..:..:.::||.:        |
plant   780 LKGLLANTATYNMLIRGFC----------RQGRIEEASEL--ITRMIGDGVSPDCI--------T 824

  Fly   584 Y-------FRR--------------DRGATLEKILKGLVKQGLSISSD--KATQL-SEQLGSELT 624
            |       .||              ::|...:::....:..|..::.:  |||:| :|.|...|.
plant   825 YTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889

  Fly   625 P 625
            |
plant   890 P 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bsfNP_523596.2 PPR repeat 142..169 CDD:276811 10/32 (31%)
PLN03218 <163..>261 CDD:215636 33/97 (34%)
PPR repeat 177..204 CDD:276811 9/26 (35%)
PPR repeat 210..239 CDD:276811 10/28 (36%)
PPR_2 213..257 CDD:463778 17/43 (40%)
PPR repeat 245..274 CDD:276811 6/28 (21%)
Pterin_binding <456..>543 CDD:444759 23/107 (21%)
LapB <661..855 CDD:442196
PPR repeat 681..704 CDD:276811
PPR repeat 710..739 CDD:276811
PPR repeat 780..818 CDD:276811
PPR repeat 825..854 CDD:276811
AT5G59900NP_200798.1 PPR repeat 106..133 CDD:276811
PPR repeat 159..185 CDD:276811
PPR_2 190..238 CDD:463778
PPR repeat 194..221 CDD:276811
PLN03218 <220..>589 CDD:215636 70/301 (23%)
PPR repeat 227..256 CDD:276811
PPR repeat 262..288 CDD:276811
PPR repeat 299..326 CDD:276811 3/7 (43%)
PPR repeat 336..361 CDD:276811 5/26 (19%)
PPR repeat 369..396 CDD:276811 9/29 (31%)
PPR repeat 404..431 CDD:276811 9/26 (35%)
PLN03218 <440..>835 CDD:215636 89/458 (19%)
PPR repeat 440..466 CDD:276811 10/25 (40%)
PPR repeat 474..501 CDD:276811 6/33 (18%)
PPR repeat 507..536 CDD:276811 9/38 (24%)
PPR repeat 542..571 CDD:276811 5/28 (18%)
PPR repeat 577..601 CDD:276811 2/24 (8%)
PPR repeat 612..641 CDD:276811 4/28 (14%)
PPR repeat 649..676 CDD:276811 6/26 (23%)
PPR repeat 682..711 CDD:276811 4/36 (11%)
PPR repeat 717..744 CDD:276811 4/26 (15%)
PPR repeat 789..816 CDD:276811 9/38 (24%)
PPR_2 820..868 CDD:463778 8/55 (15%)
PPR repeat 822..851 CDD:276811 4/36 (11%)
PPR_2 855..>894 CDD:463778 9/36 (25%)
PPR repeat 857..885 CDD:276811 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

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